Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq386 113 9e-20 seq329 86.0 1e-11 >seq386 Length=196871 Score = 113 bits (124), Expect = 9e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| ||||| || || ||||| |||| ||||| || || || || ||||| | | | Sbjct 173348 ATATTGTAATCCGACAAAGTTCGGCCATCCTCCAACTGCTTCCCTGCGAAGATCAGACGC 173289 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 ||||||||||| || |||||||| || ||||| || || || || ||| |||| Sbjct 173288 TGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTATCAATAGTG 173229 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || ||||| || || || ||||| || || || ||||| | |||||| | || |||||| Sbjct 173228 TCCGACGACTCAACCTCCAGAGTGATCGTCTTGCCAGTCAGTGTTTTCACGAAGATCTGC 173169 Query 192535 AT 192536 || Sbjct 173168 AT 173167 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||| | || | || | || | ||| || || |||||||| Sbjct 173673 ATACCACCGCGGAGACGGAGAACGAGGTGAAGCGTGGACTCCTTCTGAATGTTATAATCC 173614 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| |||| ||||||||||||||||| | | |||||| || || Sbjct 173613 GACAAAGTGCGACCATCCTCCAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGC 173554 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || || || || | || ||||| || Sbjct 173553 GGGATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGACTCC 173494 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| || || || || || || || || || | ||| |||||||| Sbjct 173493 ACCTCTAACGTGATTGTCTTTCCTGTCAACGTCTTGACAAAAATCTGCAT 173444 >seq329 Length=122043 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || ||||||||||| | || || |||| || | || || || || ||||| | | | Sbjct 117192 ATGTTATAATCAGAAAGAGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGC 117251 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 |||||||| || ||||| ||||| ||||| || || || || ||||| |||| Sbjct 117252 TGTTGATCGGGAGGTATGCCTTCCTTATCCTGGATCTTCGCCTTCACATTGTCAATAGTG 117311 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || ||||| || || | |||||||| || || || | || || | ||| |||||| Sbjct 117312 TCGGAAGATTCAACCTCCAACGTAATGGTCTTGCCCGTCAGCGTCTTGACAAAGATCTGC 117371 Query 192535 AT 192536 || Sbjct 117372 AT 117373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984469139647350