Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq533 87.8 5e-12 seq317 84.2 6e-11 >seq533 Length=111972 Score = 87.8 bits (96), Expect = 5e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 251486 CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAG 251545 |||| || |||||||| |||||||||||||| || || || || ||||||||||| || Sbjct 18878 CACCATGAGAAATCATGCAATCACGCTCCATCTCTCCAAACCGCAGACCACCATCACGGC 18819 Query 251546 CCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTT 251605 | ||||||| | || || | |||||| | || |||||| | | || || Sbjct 18818 TACGACCCTCGACTGGTTGCCTGGTGAGAATCTGCACAGGACCTCTAGCACGCGAGTGGA 18759 Query 251606 GCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651 || || | ||||||||||| || ||||||||| ||| ||||| Sbjct 18758 TTTTGTCGTCGACCATATGCTTAAGTCGCTGGTAGTATGTCGGACC 18713 >seq317 Length=21348 Score = 84.2 bits (92), Expect = 6e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 289036 GCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAAT 289095 |||||||||||||||||||| | | |||| | ||| | |||| || || || Sbjct 4820 GCATCAATTTCGTCAATGAAGACGATCGACGGCGCATTCTTCTTCGCTGAGGCGAACAAA 4879 Query 289096 TCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACT 289155 |||| ||||| || | || | ||||||| |||| || || || |||||| | || || Sbjct 4880 TCTCGGACACGAGAAGAGCCTACACCAACAAACATCTCCACGAACTCAGAACCAGACACG 4939 Query 289156 TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTT 289215 || ||| | ||||| |||||||| || ||| |||| || | |||||| || || Sbjct 4940 GAAAAGAAGGGCACATTGGCTTCGCCGGCAGTGGCCTTCGCTAGCAATGTCTTTCCGGTA 4999 Query 289216 CCAGGTGGTCC 289226 || || || || Sbjct 5000 CCTGGAGGACC 5010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471801363552157