Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq545 93.3 5e-13 >seq545 Length=209590 Score = 93.3 bits (102), Expect = 5e-13 Identities = 198/290 (68%), Gaps = 13/290 (4%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| |||||| |||||| | | | || || ||||| || || |||||| Sbjct 96939 CCCTCGTCGCGTATGATCAGTTCGTTTGAATACGTAAGACCAGGCATAAGCCCACGCTTC 96880 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| || |||| |||| |||||||| || || || ||||| || ||||| Sbjct 96879 TTGAGCCAGAATATGGATGCGAAAGACCCCGAGAAGAATATACCTTCGACAGCAGCAAAA 96820 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGC-CCTCCTTGTTGATCCACTTCATCGCCCA 869358 ||| || || || ||||||| || | || | | |||||| | |||||| Sbjct 96819 GCGACCAGACGTTCTGCAAAGG----AAGACTGCTTATCGGCGATCCAGCGTAACGCCCA 96764 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG-CGAA-AGAGGTGGTCCTT- 869415 || ||||| ||| | | | || | || ||||| ||| |||| ||| | | || || Sbjct 96763 ATCCGCCTTCTTCTTGATACAAGGTATAGTCTCGATAGCGTCGAAGAGATGCGCTCGTTG 96704 Query 869416 -TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || | ||||||||| ||| || |||| || || ||||| || ||| Sbjct 96703 CTT----CTGGTCCTTGATATATGTATCGAGGAGTAGAGAATACGTTTCC 96658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107068542307937