Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq329 114 1e-20 seq386 105 5e-18 >seq329 Length=122043 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| ||| ||| || || ||||||||||| | | ||||||| ||| ||||||||| Sbjct 116889 TGAAGAGTGCTTTCCTTCTGGATGTTATAATCGGACAGGGTGCGACCATCTTCGAGTTGT 116948 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 |||||||| | || | | ||||| ||||| |||||||| || |||||||| | || Sbjct 116949 TTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTC 117008 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 ||| || | || | ||||||||| || || || || || || || ||||| || Sbjct 117009 GCTTTCACGTTATCAATTGTGTCAGAAGACTCAACCTCCAGCGTGATCGTCTTGCCGGTG 117068 Query 29764 AAGGTTTTAACAAATATCTGCAT 29786 | || || ||||| || ||||| Sbjct 117069 AGCGTCTTGACAAAGATTTGCAT 117091 >seq386 Length=196871 Score = 105 bits (116), Expect = 5e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||||||||| || || |||||||||||||||| | |||||| Sbjct 173659 ACGGAGAACGAGGTGAAGCGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTGCGACC 173600 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| |||||| | || | | || || || ||||| ||||| || || Sbjct 173599 ATCCTCCAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGGATACCTTCCTT 173540 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||||| | || | ||||| || || || || | || | Sbjct 173539 GTCTTG-AATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGACTCCACCTCTAACGTGA 173481 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || || || ||||| |||||||| Sbjct 173480 TTGTCTTTCCTGTCAACGTCTTGACAAAAATCTGCAT 173444 Score = 104 bits (114), Expect = 2e-17 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATCGAGTTG 29642 |||||||| || ||||| || ||||| || || | ||||| | ||| ||| || || || Sbjct 173090 TGAAGCGTTGACTCTTTCTGGATGTTGTAGTCTGACAATG-TACGACCATCCTCCAGCTG 173032 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||||||| | || | | || || || || ||||| ||||| || ||||| ||| | Sbjct 173031 TTTGCCAGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATGCCCTCCTTATCTTG-AATCT 172973 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 | | |||||| | || | |||||||| ||| || ||||| || || || || || | Sbjct 172972 TAGCCTTGACATTGTCGATCGTGTCAGACGATTCGACCTCAAGGGTGATCGTCTTCCCTG 172913 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | | ||||| ||||| |||||||| Sbjct 172912 TGAGCGTTTTCACAAAGATCTGCAT 172888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385215157726401