Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq438 111 1e-18 seq299 87.8 1e-11 seq545 86.0 5e-11 >seq438 Length=104984 Score = 111 bits (122), Expect = 1e-18 Identities = 204/299 (68%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||||||||| || || ||||| |||| | |||| || | ||||| | || Sbjct 30567 ACGAGACGATTATCGAAGTCCTCACCACCCAGATGCGTATCACCCGCGGTAGCCTTCACC 30626 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | || | || || |||| || | || | ||||| |||||||| |||| || Sbjct 30627 TCAAAGATACCCTCCTCAATAGTGAGGAGCGACACATCGAAAGTTCCACCTCCCAAGTCG 30686 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || || || || | ||||| |||||||| ||||||| |||||| Sbjct 30687 AAGATGAGGACGTTGCGCTCGCCTACAGTCTTTTTGTCAAGACCGTACGCAATCGCAGCA 30746 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||| || ||||| || |||| | || || || |||| || | || |||||||| Sbjct 30747 GCAGTCGGCTCATTGATGATTCGGAGGACGTTGAGTCCAGAGATCGTGCCCGCATCTTTT 30806 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTAC 282480 ||||| || | || || ||||| ||||| ||||| ||||| | ||| ||| ||| || Sbjct 30807 GTGGCCTGGCGCTGCGAGTCGTTGAAATAGGCAGGCACAGTGACAACTGCACTTGTCAC 30865 >seq299 Length=42093 Score = 87.8 bits (96), Expect = 1e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282338 TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGA 282397 ||||| || || || | |||||||||||||| || || || | | | |||| ||| Sbjct 33689 TCAAGGCCGTATGCCAGTGCAGCAGCAGTTGGCTCGTTGATTACACGAAGGACATCAAGG 33748 Query 282398 CCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGA 282457 || |||||| ||||| || || |||||||| | ||| | ||| || || || |||||| Sbjct 33749 CCTGCAATTTGACCTGCGTCCTTGGTGGCTTGCCGTTGCGCATCATTGAAGTAGGCAGGA 33808 Query 282458 ACAGTAATAACGGCAT 282473 ||||||| ||| |||| Sbjct 33809 ACAGTAACAACAGCAT 33824 >seq545 Length=209590 Score = 86.0 bits (94), Expect = 5e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 161670 CATTAACAATACCATCAGCTGCCGCAAAAAATGCCAATACGTGCATAATAAAATTTCTAT 161729 |||||||||| ||||||| || || ||||| || | |||||| ||| |||| | | Sbjct 95039 CATTAACAATCCCATCAGAGGCGGCGAAAAAAGCAAGGACGTGCGAAATGAAATGACGCT 95098 Query 161730 CATCATCGCTCAAATGATTATTCCAATCATTCACATCTTTTGCCAAATCCACTTCTTCAA 161789 | | ||||||||| | || |||||||| | | ||||| | ||| || ||||| |||| Sbjct 95099 CGTTGTCGCTCAAACGGTTGTTCCAATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAA 95158 Query 161790 CTGTCCA 161796 ||||||| Sbjct 95159 CTGTCCA 95165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740588128538586