Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq545 192 8e-44 >seq545 Length=209590 Score = 192 bits (212), Expect = 8e-44 Identities = 381/564 (68%), Gaps = 14/564 (2%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 || |||||||| ||| || | |||||| || | | || | |||||| ||| | || Sbjct 96963 AAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGTTCGTTTGAATACGTA 96904 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || |||||||| || |||||||| |||||||| ||||||| || ||||| || || ||| Sbjct 96903 AGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCGAAAGACCCCGAGAAG 96844 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT 39793 || || ||||| || || ||||| || || || | ||| | | | | |||| Sbjct 96843 AATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAGGAAGACTGCTTATCG 96784 Query 39794 ---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 ||||| |||||||| || |||||||| | |||||| || || || ||||| Sbjct 96783 GCGATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGTATAGTCTCGATAGCG 96724 Query 39851 TTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATAC 39910 | ||||||| | || | || || | ||||||||| | | ||| |||| Sbjct 96723 TCGAAGAGATGCGCTCGTTGCTTCTGGTCCTTGATATATGTATCGAGGAGTAGAGAATAC 96664 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970 |||| || |||||||| || ||| ||||| || ||||| ||||| | ||||| | Sbjct 96663 GTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGAAACAGCGAGCTTCGGCG 96604 Query 39971 ATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCG 40030 | ||||| || |||||| || | | ||| || ||||| || || || ||| Sbjct 96603 ACCTGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTTCACGATACCGTCGGAAGCC 96544 Query 40031 GCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTA------ 40084 || || || || | |||||| ||||| ||||||||||| ||| || | Sbjct 96543 GCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATC----ATCATTTAAGCGGTC 96488 Query 40085 -TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTC 40143 |||||||| || ||| | ||| | || | ||||| || |||||||| || ||||| Sbjct 96487 CTTCCAGTCCCAGAGATCGTGTGAGAGGTCAATCTCTTCGGCAGTCCAAAAAGATGCCTC 96428 Query 40144 TGCCTTTTTGTACATGTTCCATAT 40167 ||| || |||||||| | ||| || Sbjct 96427 TGCTTTCTTGTACATCTGCCAAAT 96404 Score = 190 bits (210), Expect = 3e-43 Identities = 386/569 (68%), Gaps = 12/569 (2%) Strand=Plus/Plus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| || ||||||||||||| || | ||||||||| | ||||| | |||||| || Sbjct 94636 AACAATAGGCAGGCGAAGTCAGTGTGCATGCCCTCATCGCGGCTAATGAGTTCGTTCGAG 94695 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || | || ||||| ||||||||||| || | ||| ||||| | || || || || Sbjct 94696 AACGTCAAGCCGGGCATAAGACCACGCTTCTTCAACCAGAATATCGAGGCGAACGAGCCG 94755 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG---TAACTTGTA 39784 ||||||||||| ||||| ||||| ||||| ||||| || | ||| || ||| | Sbjct 94756 GAAAAGAAGATCCCTTCGACTGCAGCAAAGGCAACCAGACGCTCCGCGAATGAACATCCC 94815 Query 39785 TCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 | | | ||||| | | ||||||||||| |||||||| | ||||| ||||| || Sbjct 94816 TTGTCAGAAATCCAGCGCAGCGCCCAATCAGCCTTCTTCTTGATGCAAGGAATTGTCTCG 94875 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 ||||||| ||||| | | | | ||| || | ||| || || || | |||| Sbjct 94876 ATAGCATCGAAGAGGTGTTCCCGCTGTTGGGGATCCTTGATATAGGTGTCAATGAGCAGA 94935 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 || |||| ||||| ||||| || ||| ||||| || || || ||||| | ||| Sbjct 94936 GAGTATGTTTCGGAATGAATGTTCTCCATCATGATCTGGAAACCATAGAAACACCGCGCT 94995 Query 39965 TCAGTAATTTGTACCTC--TGAACAAAATCTTTCCGCCAA-ATTTTCATTCACTATTCCA 40021 || | | ||| || || || | ||| || || ||| || ||||| || || ||| Sbjct 94996 TCCGCAGCTTGGACTTCGTTGGAAAAACGCT---CGACAAGGTTCTCATTAACAATCCCA 95052 Query 40022 TCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAA- 40080 ||| ||||| ||||| || | || || ||| |||| || | | |||| Sbjct 95053 TCAGAGGCGGCGAAAAAAGCAAGGACGTGCGAAATGAAATGACGCTCGTTGTCGCTCAAA 95112 Query 40081 --TTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138 || ||||| || | | ||||| || | || ||||| ||| ||||||| || || Sbjct 95113 CGGTTGTTCCAATCGTGAAAGTCTTTCGACAAGTCGACTTCCTCAACTGTCCAGAAAGAA 95172 Query 40139 GCCTCTGCCTTTTTGTACATGTTCCATAT 40167 || || || || |||||||| | ||| || Sbjct 95173 GCTTCGGCTTTCTTGTACATTTGCCAGAT 95201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686901407144040