Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq317 95.1 1e-14 seq545 93.3 5e-14 seq536 82.4 9e-11 >seq317 Length=21348 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/243 (70%), Gaps = 13/243 (5%) Strand=Plus/Plus Query 9693 GCTTTCCC-ACGGCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGC- 9746 |||||||| | ||||||||| || |||||||||||||| | || || | ||||| Sbjct 4808 GCTTTCCCTATGGCATCAATTTCGTCAATGAAGACGATCGACGGCGCATTCTTCTTCGCT 4867 Query 9747 GAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAA 9806 ||| | || | ||| || ||||| | ||| |||||||||||||||||||| | Sbjct 4868 GAG-----GCGAACAAATCTCGGACACGAGAAGAGCCTACACCAACAAACATCTCCACGA 4922 Query 9807 AGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCG 9865 | | | | | ||| | | |||||| ||||| | ||| || ||| |||| || Sbjct 4923 ACTCAGAACCAG-ACACGGAAAAGAAGGGCACATTGGCTTCGCCGGCAGTGGCCTTCGCT 4981 Query 9866 AGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCG 9925 || | ||||| || |||||||| ||| | ||||| ||| || || |||||||| || Sbjct 4982 AGCAATGTCTTTCCGGTACCTGGAGGACCTGAGAGGATGGCGCCACGAGGAATCTTCGCA 5041 Query 9926 CCA 9928 ||| Sbjct 5042 CCA 5044 >seq545 Length=209590 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 94710 GCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTAT 94769 ||| ||||| || || ||| | || | || ||||| | ||||| ||||||||||| | Sbjct 96712 GCATCTCTTCGACGCTATCGAGACTATACCTTGTATCAAGAAGAAGGCGGATTGGGCGTT 96771 Query 94770 GAAGTGGTTTG---ATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTG 94826 ||| | | ||| |||| ||||||||| || || || |||| ||||| Sbjct 96772 ACGCTGGATCGCCGATAAGCAGTC---TTCCTTTGCAGAACGTCTGGTCGCTTTTGCTGC 96828 Query 94827 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 94886 ||| || ||||| |||||||| || || ||| | || | |||||||||||||| || Sbjct 96829 TGTCGAAGGTATATTCTTCTCGGGGTCTTTCGCATCCATATTCTGGCTCAAGAAGCGTGG 96888 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 || ||||| ||||| | || ||||| || ||| || |||||||| Sbjct 96889 GCTTATGCCTGGTCTTACGTATTCAAACGAACTGATCATACGCGACGAGGG 96939 >seq536 Length=346962 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/229 (69%), Gaps = 7/229 (3%) Strand=Plus/Plus Query 7238 TACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACTCCACAAAACGAGGAG 7297 ||||| || || ||||| ||| ||| || |||||| || || || || | ||| Sbjct 161415 TACCAGGCATCTACTTCAGAGCTGTACGGAAAAGTCGTGGAGACGCCGCAGAGCGAAACT 161474 Query 7298 ACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTC--- 7354 || |||||||||||||||||| || || ||| | ||| || || | ||| || Sbjct 161475 ACTCCCTTCTACCCACGCTCGCCATATGGTGTCGCGAAGCTTTATGCGTACTGGATCACA 161534 Query 7355 GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCAT 7414 ||| ||||| |||||| | ||||| ||| ||| ||| ||| || || ||||| || Sbjct 161535 GTC---AATTATCGCGAGGCGTACGGGATGTATGCTTGCAACGGGATTCTGTTCAATCAC 161591 Query 7415 GAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGAT-TACCGAG 7462 || ||||| || ||| | ||||| || | |||||| | ||||| Sbjct 161592 GAGAGTCCGAGGCGGGGTAGAACATTTGTAACGAGGAAGATCTCCCGAG 161640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583254522655640