Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq438 172 2e-37 seq386 172 2e-37 seq329 138 3e-27 seq501 91.5 4e-13 >seq438 Length=104984 Score = 172 bits (190), Expect = 2e-37 Identities = 274/393 (70%), Gaps = 0/393 (0%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || | || || ||||| || | || |||||||||| ||| ||| | || | Sbjct 30934 CCCGAGGAGGTCTCCTCCATGGTCTTGCTCAAGATGAAGGAAACTGCAGAATCCTACCTC 30875 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || || || ||| ||| | ||||| || |||||||| || || | ||||| Sbjct 30874 GGCACTGTTGTGACAAGTGCAGTTGTCACTGTGCCTGCCTATTTCAACGACTCGCAGCGC 30815 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || ||||||||||| |||| || | || | || || || |||| || ||||| Sbjct 30814 CAGGCCACAAAAGATGCGGGCACGATCTCTGGACTCAACGTCCTCCGAATCATCAATGAG 30755 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || |||||||| || ||||| || || ||||| |||| || || || || | Sbjct 30754 CCGACTGCTGCTGCGATTGCGTACGGTCTTGACAAAAAGACTGTAGGCGAGCGCAACGTC 30695 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || || || || ||||| ||||| ||||| || || || || |||| ||||| Sbjct 30694 CTCATCTTCGACTTGGGAGGTGGAACTTTCGATGTGTCGCTCCTCACTATTGAGGAGGGT 30635 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || ||||| || || || || || |||||||| ||||| ||||| || || || |||||| Sbjct 30634 ATCTTTGAGGTGAAGGCTACCGCGGGTGATACGCATCTGGGTGGTGAGGACTTCGATAAT 30575 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAG 349924 ||||||||| || ||||| | || || ||| Sbjct 30574 CGTCTCGTTAATCACTTTGTGCAGGAGTTCAAG 30542 >seq386 Length=196871 Score = 172 bits (190), Expect = 2e-37 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||||||||| |||||||| |||||||| ||||| || | || | ||| ||||| | Sbjct 173879 CAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTTCCA 173820 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 ||| |||||||||||||| || || |||||||| |||||||| ||||| |||||||||| Sbjct 173819 ATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCTGAA 173760 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || || |||| || || | ||||| || || || | ||||| | Sbjct 173759 TCTTGGCCTTCACGTTGTCGATCGTGTCTGACGACTCAACCTCCAGCGTGATAGTCTTGC 173700 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || ||||||||||| Sbjct 173699 CCGTAAGCGTCTTCACGAAAATCTGCAT 173672 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | ||||| || ||||| || ||||| || ||||| |||||||| Sbjct 173674 CATACCACCGCGGAGACGGAGAACGAGGTGAAGCGTGGACTCCTTCTGAATGTTATAATC 173615 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || || ||||| ||||||||||| ||||| || || || || Sbjct 173614 CGACAAAGTGCGACCATCCTCCAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGG 173555 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || ||||| || || || || || ||||||| || || | || Sbjct 173554 CGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGACTC 173495 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || | ||||||||| || | || || |||||||||||||| Sbjct 173494 CACCTCTAACGTGATTGTCTTTCCTGTCAACGTCTTGACAAAAATCTGCAT 173444 >seq329 Length=122043 Score = 138 bits (152), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || |||||| ||| || ||||| ||||||||||| | || || ||||| || | Sbjct 117167 CAAG-TGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGA 117225 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || ||||| || || || ||||| ||||| || ||||| |||||||| | Sbjct 117226 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGA 117285 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| ||||| | || || | |||||| || | |||| ||||| | Sbjct 117286 TCTTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGC 117345 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || ||||| |||||||| Sbjct 117346 CCGTCAGCGTCTTGACAAAGATCTGCAT 117373 Score = 120 bits (132), Expect = 9e-22 Identities = 152/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||| ||| || ||||| || || ||||| | || || || || |||| Sbjct 116605 CAAG-TGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCCTCAA 116663 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || ||||| || ||||||||||| || || ||||| || || || ||||||| Sbjct 116664 GCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAA 116723 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || || || | || || | ||||| || || |||| ||||||| Sbjct 116724 TCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTAATAGTCTTTC 116783 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || | || || ||||| |||||||| Sbjct 116784 CCGTCAACGTCTTGACAAAGATCTGCAT 116811 >seq501 Length=57904 Score = 91.5 bits (100), Expect = 4e-13 Identities = 221/331 (67%), Gaps = 8/331 (2%) Strand=Plus/Plus Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTG--TTTCTTACA 378177 ||| | ||| || || |||||| |||||||| | | | || | || || | || Sbjct 17599 ATCCATTCCGTCCTCGCCATATACGAATTGAATCAAGTCACCT--AGTGAATTGCGGACG 17656 Query 378178 GTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAA 378237 ||| ||| || | |||||| | ||||||||| || || | || ||||| || || Sbjct 17657 GTCCCATCGTAGCAAACCATGACATCTTCTAACGCCTTGACGAGCCGTCGCTGGATGTAT 17716 Query 378238 CCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGG 378297 || || | |||||| || ||||||||||| || || | | |||| ||||||| ||| Sbjct 17717 CCCGTCTCGGCAGTTTTGACAGCAGTATCAATCAACCCTTCTCTACCAGCCATTGCGTGG 17776 Query 378298 AAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCG 378357 ||||| || || || || | |||| || | ||||| | || | || || | || Sbjct 17777 AAGAAAAACTCCTGTGGTGTCAACCCACGAAGATATGAATTTTCGACGAAACCACGCGCT 17836 Query 378358 CCTGG--CGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATG 378415 |||| |||| |||| ||| || |||| || || || | || || ||||||| Sbjct 17837 TCTGGACCGAA--GTCATCTTTGGTGAAATGGGGCAACGTTCTATGACGGAAGCCATATG 17894 Query 378416 GAATTCGTTTTCCATCAACATTCTGTTGACC 378446 ||||||| || |||||| | || || || Sbjct 17895 GAATTCGGCGACCCTCAACAATTTGCTGGCC 17925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515237684376383