Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq549 105 7e-18 seq545 100 3e-16 >seq549 Length=95171 Score = 105 bits (116), Expect = 7e-18 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 19112 CTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACA 19171 ||| ||||||| || || |||||||| |||||| || || | || || | ||||||| Sbjct 69097 CTTCTCATGCGTGTGGCTGTCGGCATTCATGGCTCGGATATCACACGTGTACTCGAGACA 69156 Query 19172 TACGACCTGATGAGCCAGAAG--TTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCG 19229 ||| || ||||| | ||| |||||||| || || ||||||| | |||||||| | Sbjct 69157 TACCACTTGATGT--CTGAACGATTCTTCACTCATGCATCGCCGACATTGTTCAACGCGG 69214 Query 19230 GTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTG 19289 | || || ||||| || ||| ||||| ||| |||||| |||||| |||| Sbjct 69215 GGACCCCGAATGCGCAGCTGAGCTCCTGCTTCCTCGTGTGTATGAAAGATGACTCTATTG 69274 Query 19290 AGGGCATCTACGAGAC 19305 ||||||||||||| || Sbjct 69275 AGGGCATCTACGACAC 69290 Score = 104 bits (114), Expect = 3e-17 Identities = 403/623 (65%), Gaps = 24/623 (4%) Strand=Plus/Minus Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606 ||||| |||||||| |||||||| |||| ||| || |||||| ||||||||||| Sbjct 70600 GTGTATGGCTCGAAGCACTCGTTGTAACCCAAGATTTGACTGGTCGATGCGGTCGGCATA 70541 Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT----TAGGCC 78662 || || || || | |||||||||||| |||||| || |||| | |||| | ||| Sbjct 70540 GGAGCAACAAGCAAAGAATTCCGAAGGCCATGCTTCGCAATCTTGTCCTTCAACGATGCC 70481 Query 78663 --GTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTC-GGA 78719 ||||| || || | || || |||||||| || || | | | |||| || Sbjct 70480 CAATCCCACAAGTCCGAAGGCGTGACGCCCCACATATCGTACTGCA-GCTCTCCTCTCGA 70422 Query 78720 CGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC---GCATGA 78776 || || || | | | ||||| || | || || | |||| || || | Sbjct 70421 GGCAGGGCTTCCTTCGTATGTCTCATATGGACCGTCGACGGCAGCGATCTCACAGCTAGC 70362 Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836 ||| ||||| || ||||| | | ||||| || |||||| ||||| ||||||| Sbjct 70361 TTCG---AGGGCAGCATGGTAAATCGTTTCGAAAATCTGCTTGTTCAGCTCACGCGCCTC 70305 Query 78837 GGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGAT 78896 || ||||| | | | |||| ||||||| ||||||| | ||| | ||||| | Sbjct 70304 GGGAGAATCGAAAGGCATACGGAGCGCCATGAAGGCATCGGCTAAGCCATTCACGCCAAC 70245 Query 78897 AGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGG---TCGGGTAAAAGTT 78953 |||| || || || ||||| ||| ||| ||||||| ||||| |||| Sbjct 70244 GCCGATGGGACGATGCCGCATATTG---GAACGGCGAGCCTCGGGAACAGGGTAGTAGTT 70188 Query 78954 CCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGC 79013 ||||||| ||| || ||||| || |||||| || || |||| | | Sbjct 70187 GACCTCGATGATGCGATTTAGGTTGAATGTTACGACCTTAGCAACATCGTGTAGCCTCTG 70128 Query 79014 GAAATCAAAATGATTTCCTTTGATGAAAGTCGGTAG-GC-ACAGCGATGCCAGGTTGCAC 79071 ||| | | | | || | |||| | | || || || ||| || || || || || Sbjct 70127 GAAGTTATACCGGCCACCCTCGATGCAGGATGGGAGAGCGACA--GAAGCAAGATTACAG 70070 Query 79072 ACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTG 79131 |||||||| ||||| || ||| || | || || ||||| | ||| ||||||||| Sbjct 70069 ACGGCCGTTTCGTCAGGAGAAGAGTATTCCACAATCTCCGTGCAGAGATTGGACGACTTG 70010 Query 79132 ATGGTGCCGATGTTCTTCTGGTT 79154 ||||| || | | | ||||||| Sbjct 70009 ATGGTTCCCAGATGCCTCTGGTT 69987 >seq545 Length=209590 Score = 100 bits (110), Expect = 3e-16 Identities = 281/419 (67%), Gaps = 13/419 (3%) Strand=Plus/Plus Query 59703 GTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGAC-ATGAACTT 59761 || || |||||||||||||| || || || |||| || ||| | | | || | || Sbjct 96527 GTACTCGCCTTCTTCGCGGCTTCCGACGGTATCGTGAACGAGAATCTTGTCGATCGA-TT 96585 Query 59762 TTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGA 59821 ||| || || || ||| | ||||| || || | ||||||| | ||| | | || Sbjct 96586 TTCGAACGAAGTACAGGTCGCCGAAGCTCGCTGTTTCTACGGTTTCCAGATCATGATAGA 96645 Query 59822 GTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGA 59881 | |||||||| || ||||| || || | |||||| | ||||||| || |||| Sbjct 96646 GAACATCCACTCGGAAACGTATTCTCTACTCCTCGATACATATATCAAGGA-CCAGAAGC 96704 Query 59882 GAAG-GCTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAA 59939 | | || ||| ||| || || ||||| | || | | | || | || || || Sbjct 96705 AACGAGCGCATCTCTTCGACGCTATCGAGACTATACCTTGTA-TCAAGAAGAAGGCGGAT 96763 Query 59940 TGGGCCATGCAGTGGATGAGTCCTGGAGCA----TCATTTGCACAACGTCTCATAGCTTT 59995 ||||| | | ||||| | | |||| || |||||| ||||||| | ||||| Sbjct 96764 TGGGCGTTACGCTGGATC-GCCGATAAGCAGTCTTCCTTTGCAGAACGTCTGGTCGCTTT 96822 Query 59996 TGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAA 60054 ||| ||| || ||||| || |||||||| || || ||| | || ||||||||||| | Sbjct 96823 TGC-TGCTGTCGAAGGTATATTCTTCTCGGGGTCTTTCGCATCCATATTCTGGCTCAAGA 96881 Query 60055 AGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 ||||||| || ||||| || || | | || ||||| ||||| || ||||||||| Sbjct 96882 AGCGTGGGCTTATGCCTGGTCTTACGTATTCAAACGAACTGATCATACGCGACGAGGGC 96940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548518896501840