Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq329 183 3e-41 seq386 152 6e-32 seq536 98.7 1e-15 seq461 89.7 6e-13 seq281 89.7 6e-13 seq678 82.4 9e-11 >seq329 Length=122043 Score = 183 bits (202), Expect = 3e-41 Identities = 164/206 (80%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||||||||||||||| ||||||||||| || || || ||||||||||| | Sbjct 117091 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAGACGATCACGCTGGAGGTTGAGTCTTCT 117032 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || |||| || || || || |||||||| || ||||| || |||||| Sbjct 117031 GACACAATTGATAACGTGAAAGCGAAGATCCAAGACAAGGAAGGTATTCCCCCGGACCAG 116972 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| || |||||||| |||| ||| ||||| | || ||||| Sbjct 116971 CAGCGTCTTATCTTCGCTGGCAAACAACTCGAAGATGGTCGCACCCTGTCCGATTATAAC 116912 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| |||||| ||||||||| || Sbjct 116911 ATCCAGAAGGAAAGCACTCTTCACCT 116886 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||||||| | || || ||||||||||| || ||||||||||| Sbjct 116811 ATGCAGATCTTTGTCAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTTCC 116752 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || ||||||| || ||||||||||||||||| ||||| || |||||| Sbjct 116751 GACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 116692 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| |||||||| || ||||| || ||||| | |||||||| | ||||| || Sbjct 116691 CAACGTCTCATTTTTGCCGGGAAGCAGCTTGAGGACGGACGTACCCTTTCTGACTACAAC 116632 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||||| || | || | ||||| ||||| || Sbjct 116631 ATTCAGAAGGAGAGCACTCTCCACTTGGTGCTTCGTCTGCGCGGCGG 116585 Score = 138 bits (152), Expect = 1e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||||||||| || |||||||| ||||| | |||||||| || Sbjct 117373 ATGCAGATCTTTGTCAAGACGCTGACGGGCAAGACCATTACGTTGGAGGTTGAATCTTCC 117314 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| ||||||| || || ||||| ||||| || || ||||| || || Sbjct 117313 GACACTATTGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGCATACCTCCCGATCAA 117254 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||||| ||| || || | || ||||| Sbjct 117253 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTATAAC 117194 Query 27586 GTCCAAAAGGA 27596 | || ||||| Sbjct 117193 ATTCAGAAGGA 117183 >seq386 Length=196871 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || |||||||||||| | || || ||||| || || | ||||| ||||| Sbjct 173444 ATGCAGATTTTTGTCAAGACGTTGACAGGAAAGACAATCACGTTAGAGGTGGAGTCGTCG 173503 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||||| || ||||| |||||||| || || || |||||||| Sbjct 173504 GACACGATTGACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCGCCAGACCAA 173563 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||||||||| || || ||||||| ||| || | | || ||||| Sbjct 173564 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAGGATGGTCGCACTTTGTCGGATTATAAC 173623 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| ||||| || || | ||||| |||||||| Sbjct 173624 ATTCAGAAGGAGTCCACGCTTCACCTCGTTCTCCGTCTCCGCGGTGG 173670 Score = 147 bits (162), Expect = 2e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||||||||| ||||||||||| || || ||||||||||| Sbjct 173672 ATGCAGATTTTCGTGAAGACGCTTACGGGCAAGACTATCACGCTGGAGGTTGAGTCGTCA 173731 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || |||||||| ||||| || |||||||| || ||| Sbjct 173732 GACACGATCGACAACGTGAAGGCCAAGATTCAGGATAAGGAAGGTATTCCTCCCGATCAG 173791 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| |||||| | || || | | || || | || || ||| Sbjct 173792 CAGCGCCTTATCTTTGCTGGAAAGCAATTGGAAGACGGGAGGACGCTGTCGGATTACAAT 173851 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | || || || |||||||||||||| Sbjct 173852 ATTCAGAAAGAGTCCACTCTTCATCT 173877 Score = 123 bits (136), Expect = 3e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || || |||||||| || ||||| ||||||||||| Sbjct 173167 ATGCAGATCTTCGTGAAAACACTGACTGGCAAGACGATCACTCTGGAGGTTGAGTCGTCG 173226 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| || ||||| |||||||| ||||| || || || || Sbjct 173227 GACACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGAATCCCCCCTGATCAA 173286 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| | ||||||| || || | | || || ||| Sbjct 173287 CAGCGTCTGATCTTCGCAGGGAAGCAGTTGGAGGATGGCCGAACTTTGTCGGATTACAAT 173346 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | || ||||| || || ||||| || Sbjct 173347 ATTCAGAAGGAGTCGACGCTTCACCT 173372 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 27509 GAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTA 27568 |||| || || ||||| ||||| || || || || || ||||| |||||||| | |||| Sbjct 172763 GAATCCCCCCTGACCAACAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTA 172822 Query 27569 CCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCG 27628 | || |||| || || |||| ||||||||||||||||| || || | ||||| || | Sbjct 172823 CGCTGTCAGATTACAACATCCAGAAGGAATCCACTCTTCACCTTGTGCTTCGTCTCCGTG 172882 Query 27629 GTGG 27632 | || Sbjct 172883 GCGG 172886 >seq536 Length=346962 Score = 98.7 bits (108), Expect = 1e-15 Identities = 215/326 (66%), Gaps = 10/326 (3%) Strand=Plus/Plus Query 24585 GAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCGTTTGACCAACCCGAGTAC 24644 ||||| |||||||| || || ||||| |||||||| |||| ||||| | |||||| Sbjct 161274 GAGGTATATAACCTCGGCGCGCAGTCGCACGTCAAAGTGTCCTTTGAGATGGCGGAGTAC 161333 Query 24645 ACGGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNNNNN 24704 || | ||||||||| || || ||||| | | || || || || | Sbjct 161334 ACAGGAGACGTGGATGGGCTTGGAACCCTGCGGCTCCTGGATGCGATCAG-----GACAT 161388 Query 24705 NNNNNNTTGAAATTCA-----GATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGG 24759 | |||| || | ||||| ||||| ||| ||| ||| || || | Sbjct 161389 GTGGACTGGAAAAGCACGTACGGTTTTACCAGGCATCTACTTCAGAGCTGTACGGAAAAG 161448 Query 24760 TGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCT 24819 | ||||||||| ||| || || ||||| || || || || || ||||| ||| Sbjct 161449 TCGTGGAGACGCCGCAGAGCGAAACTACTCCCTTCTACCCACGCTCGCCATATGGTGTCG 161508 Query 24820 CAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCAT 24879 | ||| | | ||||||||||| || || || || ||||| | ||||| ||||| | Sbjct 161509 CGAAGCTTTATGCGTACTGGATCACAGTCAATTATCGCGAGGCGTACGGGATGTATGCTT 161568 Query 24880 GCAACGGAATTCTGTTCAACCATGAG 24905 ||||||| ||||||||||| || ||| Sbjct 161569 GCAACGGGATTCTGTTCAATCACGAG 161594 >seq461 Length=77631 Score = 89.7 bits (98), Expect = 6e-13 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 ||||| || |||||||||||||| || || || || || || |||||||||| ||| ||| Sbjct 71206 ATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAACAGCTCGAGGATGGTCGCACC 71265 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 || ||| ||||| || |||| ||||| || || ||||| || || | || || || || Sbjct 71266 CTCAGC-GACTACAACATCCAGAAGGAGTCTACCCTTCACCTCGTGCTCCGCCTGCGTGG 71324 Query 27630 TGG 27632 ||| Sbjct 71325 TGG 71327 >seq281 Length=84010 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| ||||| || |||||||| || || ||||| ||||| Sbjct 66468 ATGCAGATCTTCGTAAAGACCCTTACAGGGAAGACTATCACGCTAGAGGTGGAGTCTTCC 66409 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| |||| || |||||||||||||||||||| Sbjct 66408 GACACCATCGACAATGTGAAAGCCAAAATTCAGGACAAGGAGGG 66365 >seq678 Length=16331 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/233 (68%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 30327 TGGAATTCCCATTAAGAAACACCCTACCGAAAAAATCTGGATCCCCGAACTCATTTTTGG 30386 ||| |||||||| ||| ||| | | || || |||| ||||| |||||||| || || Sbjct 14679 TGGTATTCCCATCGAGATGCACTCCAAGGAGAAGATCTACATCCCGGAACTCATCTTCGG 14620 Query 30387 GCACCTTTTGACAAGCTCCAACTACAACGACGAGGAGCAGCGCGTGACGGGTGGACGAAA 30446 ||| | || | ||||| || ||||||| ||| || |||| || || || || Sbjct 14619 GCATTTGTTATCTTCTTCCAATTATGACGACGACGAGAAGAAGCTGACAGGAGGTCGCAA 14560 Query 30447 TGGCTACGGTGCAAAGCTCGCCAACGTTT--TCAGTTCCCTATTCAAAATCAAAATTAGT 30504 || |||||||| || ||||| ||| | | ||||| | |||| ||| | | | Sbjct 14559 CGGATACGGTGCCAAACTCGCGAACATCTACTCAGT--CGAGTTCACGATCGACACTGCG 14502 Query 30505 GACGGGAAGA------AGATATATGAGCAGACTTGGACAGATAACATGAGCAA 30551 ||| ||| | ||| |||| ||||| |||||||||||||||||||| Sbjct 14501 GACAAGAATACGGGTCAGAAGTATGTACAGACGTGGACAGATAACATGAGCAA 14449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304262034320