Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq329 129 4e-25 seq386 111 1e-19 >seq329 Length=122043 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | |||||| ||||||||||||||||| |||||||| || || ||| Sbjct 116585 CCGCCGCGCAGACGAAGCACCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAA 116644 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || || |||||||| || | ||| || |||||||| || Sbjct 116645 AGGGTACGTCCGTCCTCAAGCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGGA 116704 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| || | || ||| | || ||||| ||| || Sbjct 116705 ATGCCCTCCTTGTC-CTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAAC 116763 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || || || ||||| || ||||| |||||||| Sbjct 116764 CTCGAGGGTAATAGTCTTTCCCGTCAACGTCTTGACAAAGATCTGCAT 116811 Score = 127 bits (140), Expect = 1e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||||| ||||| || ||||||||||| || || || || | ||||| |||||| Sbjct 116889 TGAAGAGTGCTTTCCTTCTGGATGTTATAATCGGACAGGGTGCGACCATCTTCGAGTTGT 116948 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || | |||||| |||||||| || | || ||||||||| |||| || Sbjct 116949 TTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATC-TT 117007 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | ||| ||| || ||||||||| ||| || |||| || ||||| || ||||| Sbjct 117008 CGCTTTCACGTTATCAATTGTGTCAGAAGACTCAACCTCCAGCGTGATCGTCTTGCCGGT 117067 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | ||| || ||||| || ||||| Sbjct 117068 GAGCGTCTTGACAAAGATTTGCAT 117091 Score = 91.5 bits (100), Expect = 9e-14 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 34499 CCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAA 34558 |||| |||||||| |||||||| |||||||||||||| ||||| || || | || || | Sbjct 117166 CCAAGTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGA 117225 Query 34559 GTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGA 34618 | || || ||||| || || | |||||||| || || || | || ||||| || || Sbjct 117226 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGA 117285 Query 34619 TCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 || || | || || | ||| ||||| || || |||| || || || || Sbjct 117286 TC-TTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTG 117344 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | ||| || ||||| |||||||| Sbjct 117345 CCCGTCAGCGTCTTGACAAAGATCTGCAT 117373 >seq386 Length=196871 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| |||||| |||||||||||||| || | || || | || || || ||| Sbjct 173646 TGAAGCGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTGCGACCATCCTCCAGCTGT 173587 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| ||||| || | |||||||||||| ||||| | || ||||||||| ||| || Sbjct 173586 TTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGGATACCTTCCTTGTCT-TGAATCTT 173528 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | ||| ||||| |||||| || | || || || || || || Sbjct 173527 GGCCTTGACGTTGTCAATCGTGTCCGACGACTCCACCTCTAACGTGATTGTCTTTCCTGT 173468 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 ||||| || ||||||||||||||| Sbjct 173467 CAACGTCTTGACAAAAATCTGCATG 173443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726297404613