Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq329 100 2e-16 seq386 86.0 5e-12 >seq329 Length=122043 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||||| || || || || |||||||||| || || || | || || || ||| Sbjct 116889 TGAAGAGTGCTTTCCTTCTGGATGTTATAATCGGACAGGGTGCGACCATCTTCGAGTTGT 116948 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || ||||||||||||||||| | ||| | | || ||||| ||| ||| Sbjct 116949 TTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATCTTC 117008 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 ||| | | | | || || ||||| || |||| |||||| | || || || Sbjct 117009 GCTTTCACGTTATCAATTGTGTCAGAAGACTCAACCTCCAGCGTGATCGTCTTGCCGGTG 117068 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 ||||| || |||||||||||||| Sbjct 117069 AGCGTCTTGACAAAGATTTGCAT 117091 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 39077 CCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAA 39136 |||| || || || ||||| || || || |||||||| | ||| || || | || || | Sbjct 117166 CCAAGTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGA 117225 Query 39137 GCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGA 39196 |||| ||||| || || || || ||||| || |||| || | || || || ||| || Sbjct 117226 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGA 117285 Query 39197 TTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTC 39256 | ||| || | | | | || ||| || || || |||| ||| || | || | Sbjct 117286 TCTTCGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGC 117345 Query 39257 CCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||||| || |||||||| ||||| Sbjct 117346 CCGTCAGCGTCTTGACAAAGATCTGCAT 117373 >seq386 Length=196871 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || |||||| ||| || || || |||||||| | | || || | || || |||||| Sbjct 173646 TGAAGCGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTGCGACCATCCTCCAGCTGT 173587 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || ||||| ||||||||||| ||||| | || | | || ||||| || || Sbjct 173586 TTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGGATACCTTCCTTGTCTTGAATCTTG 173527 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | ||| || ||||||||| || | |||||| | ||||| || Sbjct 173526 GCCTTGA-CGTTGTCAATCGTGTCCGACGACTCCACCTCTAACGTGATTGTCTTTCCTGT 173468 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || ||| || ||||| || ||||| Sbjct 173467 CAACGTCTTGACAAAAATCTGCAT 173444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429541092590093