Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq386 113 3e-20 seq329 93.3 3e-14 >seq386 Length=196871 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | || ||||| || ||||| | || || || || || Sbjct 173444 ATGCAGATTTTTGTCAAGACGTTGACAGGAAAGACAATCACGTTAGAGGTGGAGTCGTCG 173503 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| ||||| |||||| | |||||||| ||| Sbjct 173504 GACACGATTGACAACGTCAAGGCCAAGATTCAAGACAAGGAAGGTATCCCGCCAGACCAA 173563 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || ||||| ||||| || | |||||||| ||||| ||| Sbjct 173564 CAGCGTCTTATCTTTGCTGGTAAACAGCTGGAGGATGGTCGCACTTTGTCGGATTATAAC 173623 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 173624 ATTCAGAAGGAGTCCAC 173640 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| || || || || ||||||||||| || ||||| || || Sbjct 173167 ATGCAGATCTTCGTGAAAACACTGACTGGCAAGACGATCACTCTGGAGGTTGAGTCGTCG 173226 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||| | | || || ||| ||||| ||||| | || || |||||| Sbjct 173227 GACACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGAATCCCCCCTGATCAA 173286 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || |||| || | || ||||| |||||||| Sbjct 173287 CAGCGTCTGATCTTCGCAGGGAAGCAGTTGGAGGATGGCCGAACTTTGTCGGATTACAAT 173346 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 173347 ATTCAGAAGGAGTCGAC 173363 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || || ||||| || || ||||| || || ||||| || | Sbjct 173672 ATGCAGATTTTCGTGAAGACGCTTACGGGCAAGACTATCACGCTGGAGGTTGAGTCGTCA 173731 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || ||| || || |||||| | || || ||||| Sbjct 173732 GACACGATCGACAACGTGAAGGCCAAGATTCAGGATAAGGAAGGTATTCCTCCCGATCAG 173791 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| || || ||| ||||||||| | || | |||||||| Sbjct 173792 CAGCGCCTTATCTTTGCTGGAAAGCAATTGGAAGACGGGAGGACGCTGTCGGATTACAAT 173851 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||||||||| Sbjct 173852 ATTCAGAAAGAGTCCAC 173868 >seq329 Length=122043 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || ||||| || || |||||||| || || ||||| || | Sbjct 117091 ATGCAAATCTTTGTCAAGACGCTCACCGGCAAGACGATCACGCTGGAGGTTGAGTCTTCT 117032 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || || ||||| |||||| | || || || || Sbjct 117031 GACACAATTGATAACGTGAAAGCGAAGATCCAAGACAAGGAAGGTATTCCCCCGGACCAG 116972 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || ||||||||||| ||||| | ||||| | |||||| ||| Sbjct 116971 CAGCGTCTTATCTTCGCTGGCAAACAACTCGAAGATGGTCGCACCCTGTCCGATTATAAC 116912 Query 23791 ATACAAAAAGA 23801 || || || || Sbjct 116911 ATCCAGAAGGA 116901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338006053117388