Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq386 150 4e-31 seq329 141 2e-28 seq630 122 2e-22 >seq386 Length=196871 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 |||| || |||||||| ||||| || | ||||||||| | || || ||||| ||||| | Sbjct 173879 CAAGATGAAGAGTGGACTCTTTCTGAATATTGTAATCCGACAGCGTCCTCCCGTCTTCCA 173820 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||| ||||| |||||||| || || || ||||| |||||||||||||| || || | Sbjct 173819 ATTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTATCCTGAA 173760 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| |||||| ||||| |||||||| | || || || | |||||| ||||||| Sbjct 173759 TCTTGGCCTTCACGTTGTCGATCGTGTCTGACGACTCAACCTCCAGCGTGATAGTCTTGC 173700 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||| | || || | ||| | ||||| Sbjct 173699 CCGTAAGCGTCTTCACGAAAATCTGCAT 173672 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||||| || || || | || ||||| | |||||| | ||||| Sbjct 173655 AGAACGAGGTGAAGCGTGGACTCCTTCTGAATGTTATAATCCGACAAAGTGCGACCATCC 173596 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||| |||||||| || |||||||| ||||| ||||||||||||||| Sbjct 173595 TCCAGCTGTTTACCAGCAAAGATAAGACGCTGTTGGTCTGGCGGGATACCTTCCTTGTCT 173536 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || || || ||||| || | ||||| ||||||||||| ||| Sbjct 173535 TGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGACTCCACCTCTAACGTGATTGTC 173476 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 173475 TTTCCTGTCAACGTCTT 173459 Score = 145 bits (160), Expect = 2e-29 Identities = 157/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| || || || || || || | ||||||||| | |||||||| ||||| || | Sbjct 173374 CAAGGTGAAGCGTCGACTCCTTCTGAATATTGTAATCCGACAAAGTTCGGCCATCCTCCA 173315 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 ||||||||| |||||||| || || ||||| || || || || |||||||||||||| | Sbjct 173314 ACTGCTTCCCTGCGAAGATCAGACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAA 173255 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| |||||| || || ||||| || | || || || | ||||||||||||| Sbjct 173254 TCTTCGCCTTCACGTTATCAATAGTGTCCGACGACTCAACCTCCAGAGTGATCGTCTTGC 173195 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 | |||| ||||| | ||| | ||||| Sbjct 173194 CAGTCAGTGTTTTCACGAAGATCTGCAT 173167 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 ||||| || || || ||||| |||| ||||| || | ||| || | ||||| || ||| Sbjct 173093 AGGTGAAGCGTTGACTCTTTCTGGATGTTGTAGTCTGACAATGTACGACCATCCTCCAGC 173034 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 || || ||||||||||| || || |||||||| || ||||| || ||||| ||||| ||| Sbjct 173033 TGTTTGCCAGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATGCCCTCCTTATCTTGAATC 172974 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||| ||| ||||| ||||| || | ||| || || | ||||||||||| || Sbjct 172973 TTAGCCTTGACATTGTCGATCGTGTCAGACGATTCGACCTCAAGGGTGATCGTCTTCCCT 172914 Query 225688 GTCAAAGTTTT 225698 || | ||||| Sbjct 172913 GTGAGCGTTTT 172903 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| ||||||||||| || |||| |||||||| | || || | || || Sbjct 172871 AGCACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGACAGCGTACGGCCGTCC 172812 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || |||||||| || ||||||||||| || |||||||| || || || Sbjct 172811 TCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCAGGGGGGAT 172765 >seq329 Length=122043 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 ||||| |||||| ||| || |||| || ||||||| || || | |||||||| || Sbjct 116886 AGGTGAAGAGTGCTTTCCTTCTGGATGTTATAATCGGACAGGGTGCGACCATCTTCGAGT 116945 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 || || |||||||||||||| || || ||||| || |||||||||||||||||||||||| Sbjct 116946 TGTTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCTTCCTTGTCTTGGATC 117005 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||||| || || ||||| || | || || || | ||||||||||||||| Sbjct 117006 TTCGCTTTCACGTTATCAATTGTGTCAGAAGACTCAACCTCCAGCGTGATCGTCTTGCCG 117065 Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713 || | || || | || | |||||| Sbjct 117066 GTGAGCGTCTTGACAAAGATTTGCAT 117091 Score = 122 bits (134), Expect = 2e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||||||||| || || || | || ||||| | | ||| | ||||| || ||||| Sbjct 117170 GTGGAGAGTACTCTCCTTCTGAATGTTATAATCAGAAAGAGTGCGACCATCCTCGAGCTG 117229 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || |||||||| || || ||||| ||||| || || |||||||| || |||||||| Sbjct 117230 CTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGTATGCCTTCCTTATCCTGGATCTT 117289 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||||||| || || ||||| || | ||| || || ||||| || ||||||||||| Sbjct 117290 CGCCTTCACATTGTCAATAGTGTCGGAAGATTCAACCTCCAACGTAATGGTCTTGCCCGT 117349 Query 225690 CA 225691 || Sbjct 117350 CA 117351 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||||||| || || || | ||||| || | | || | || || Sbjct 116600 AGCACCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTACGTCCGTCC 116659 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||||||||| || || || || ||||| ||||| || ||||| || |||||||| Sbjct 116660 TCAAGCTGCTTCCCGGCAAAAATGAGACGTTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 116719 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| ||||||||||| || | || || || | || || ||| Sbjct 116720 TGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTAATAGTC 116779 Query 225682 TTGCCCGTCAAAGTTTT 225698 || |||||||| || || Sbjct 116780 TTTCCCGTCAACGTCTT 116796 >seq630 Length=3758 Score = 122 bits (134), Expect = 2e-22 Identities = 194/276 (70%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 7445 TATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAA 7504 |||||||||| |||| | ||| ||||||| |||||||| ||||||| | | || | Sbjct 3162 TATATTTAATCTTTGCAGTATTTGCTGGTATGATAGGTACAGCATTTTCTGTTTTGATTA 3103 Query 7505 GGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACG 7564 | |||||| || || ||| ||| ||||||||| ||| || |||||| | || | Sbjct 3102 GATTAGAACTATCTAGTCCTGGTGTTCAAATATTACAAGGTGATCACCAACTATTTAATG 3043 Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAG 7624 | || || || || || || || ||||||||||||| | |||||||| | | ||| Sbjct 3042 TAATAATAACTGCACACGCATTCATTATGATTTTCTTCATGGTTATGCCTGCATTAGTAG 2983 Query 7625 GCGGTTTCGGAAATTGATTCGTTCC-TTTAATGATTGGTGCTCCTGATATGGCTTTTCCA 7683 | ||||| || || | || | || || | | | || ||||| ||||||||||| || Sbjct 2982 GTGGTTTTGGTAACTACTTATTACCAGTTCAAG-TGGGAGCTCCGGATATGGCTTTCCCT 2924 Query 7684 AGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719 || | || ||||| ||||| ||| |||| ||| Sbjct 2923 AGATTGAATAATATCTCATTTTGGTTATTACCACCT 2888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192518044517534