Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq545 199 5e-46 >seq545 Length=209590 Score = 199 bits (220), Expect = 5e-46 Identities = 386/566 (68%), Gaps = 18/566 (3%) Strand=Plus/Minus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 ||||| || |||||| || | || || || | | || | |||||| ||| | || Sbjct 96963 AAACAGGCGAAATCAGTGTGCATGCCCTCGTCGCGTATGATCAGTTCGTTTGAATACGTA 96904 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 ||||| ||||| || ||||| || |||||||| ||||| | |||||||| || || ||| Sbjct 96903 AGACCAGGCATAAGCCCACGCTTCTTGAGCCAGAATATGGATGCGAAAGACCCCGAGAAG 96844 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA-----ACTGGCTTCGT 48312 ||||| ||||| || || ||||| ||| || | ||| | | |||| ||| Sbjct 96843 AATATACCTTCGACAGCAGCAAAAGCGACCAGACGTTCTGCAAAGGAAGACTG-CTTATC 96785 Query 48313 TGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAG 48372 | | ||||| ||| |||||||| ||||||||||| | |||||| || || || |||| Sbjct 96784 GGCG-ATCCAGCGTAACGCCCAATCCGCCTTCTTCTTGATACAAGGTATAGTCTCGATAG 96726 Query 48373 CATTAAAGAGAAAGtttttttCATTGCTA----TCTTTAACGTAAGTATCTATTAAAAGA 48428 | | |||||| | || ||||| || || | || ||||| | | ||| Sbjct 96725 CGTCGAAGAGA----TGCGCTCGTTGCTTCTGGTCCTTGATATATGTATCGAGGAGTAGA 96670 Query 48429 CTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCT 48488 |||| |||| ||||| || || || || ||||| || ||||| ||||| | ||| Sbjct 96669 GAATACGTTTCCGAGTGGATGTTCTCTATCATGATCTGGAAACCGTAGAAACAGCGAGCT 96610 Query 48489 TCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCA 48548 || | || |||||| || | ||||||| || | | |||||| || || || || || Sbjct 96609 TCGGCGACCTGTACTTCGTTCGAAAATCGATCGACAAGATTCTCGTTCACGATACCGTCG 96550 Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GT 48605 ||| || || || || | |||||| ||||| |||||||| | | | | | Sbjct 96549 GAAGCCGCGAAGAAGGCGAGTACATGCGAGATAAAGTATTTTTCATCATCATTTAAGCGG 96490 Query 48606 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCC 48665 | |||||||| || ||| | ||| | || | ||||| || |||||||| |||||| Sbjct 96489 TCCTTCCAGTCCCAGAGATCGTGTGAGAGGTCAATCTCTTCGGCAGTCCAAAAAGATGCC 96430 Query 48666 TCTGCTTTTTTATACATATTCCATAT 48691 |||||||| || ||||| | ||| || Sbjct 96429 TCTGCTTTCTTGTACATCTGCCAAAT 96404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694661323627040