Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibroporia_20radiculosa_20[genbank_20GCA_5F000313525.1_202012-03-30] 861 sequences; 28,378,039 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq329 147 5e-30 seq386 140 8e-28 >seq329 Length=122043 Score = 147 bits (162), Expect = 5e-30 Identities = 146/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| || || |||||||| || ||||| || || ||| Sbjct 117088 CAAATCTTTGTCAAGACGCTCACCGGCAAGACGATCACGCTGGAGGTTGAGTCTTCTGAC 117029 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| ||| ||||| || ||||| ||||| || || ||||||||||| Sbjct 117028 ACAATTGATAACGTGAAAGCGAAGATCCAAGACAAGGAAGGTATTCCCCCGGACCAGCAG 116969 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || ||||| ||||||||||| | || || ||||||||||| || Sbjct 116968 CGTCTTATCTTCGCTGGCAAACAACTCGAAGATGGTCGCACCCTGTCCGATTATAACATC 116909 Query 178104 CAAAAAGAA 178112 || || ||| Sbjct 116908 CAGAAGGAA 116900 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || ||||| || || ||||||||||| || || ||| Sbjct 116808 CAGATCTTTGTCAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCTTCCGAC 116749 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| || || || || |||||||||||| Sbjct 116748 ACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAA 116689 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || ||||| || ||||| || || ||| | || ||| | || || ||| | Sbjct 116688 CGTCTCATTTTTGCCGGGAAGCAGCTTGAGGACGGACGTACCCTTTCTGACTACAACATT 116629 Query 178104 CAAAAAGA 178111 || || || Sbjct 116628 CAGAAGGA 116621 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || || || | ||||| ||| || ||| Sbjct 117370 CAGATCTTTGTCAAGACGCTGACGGGCAAGACCATTACGTTGGAGGTTGAATCTTCCGAC 117311 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||||| || ||||| || ||||| || || || Sbjct 117310 ACTATTGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGCATACCTCCCGATCAACAG 117251 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | |||||| | ||||||||| | Sbjct 117250 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCTGATTATAACATT 117191 Query 178104 CAAAAAGA 178111 || || || Sbjct 117190 CAGAAGGA 117183 Score = 87.8 bits (96), Expect = 4e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 |||||||||| ||||||||||| ||||||||||| || || |||||||| ||||| | | Sbjct 117551 GAATCCCTCCTGACCAGCAACGCCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCA 117492 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGA 178111 | || |||| || ||| |||| ||||| Sbjct 117491 CCCTCTCCGACTACAACATCCAGAAAGA 117464 >seq386 Length=196871 Score = 140 bits (154), Expect = 8e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || || || || ||||| || ||||| || |||||| Sbjct 173675 CAGATTTTCGTGAAGACGCTTACGGGCAAGACTATCACGCTGGAGGTTGAGTCGTCAGAC 173734 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||||||||| || ||||| || ||||| || ||||| Sbjct 173735 ACGATCGACAACGTGAAGGCCAAGATTCAGGATAAGGAAGGTATTCCTCCCGATCAGCAG 173794 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||| || | ||||| || ||||| || | ||||| || | Sbjct 173795 CGCCTTATCTTTGCTGGAAAGCAATTGGAAGACGGGAGGACGCTGTCGGATTACAATATT 173854 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || ||||||| Sbjct 173855 CAGAAAGAGTCCACTCTTCATCTTG 173879 Score = 136 bits (150), Expect = 1e-26 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || |||||||| |||||||| || ||||||||||| ||||| ||| || ||| Sbjct 172891 CAGATCTTTGTGAAAACGCTCACAGGGAAGACGATCACCCTTGAGGTCGAATCGTCTGAC 172950 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||| || || || || || || || ||||| || Sbjct 172951 ACGATCGACAATGTCAAGGCTAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAACAG 173010 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || |||||||| || ||||| | || | | || || ||| || Sbjct 173011 CGCCTCATCTTCGCTGGCAAACAGCTGGAGGATGGTCGTACATTGTCAGACTACAACATC 173070 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || ||||| ||||| || || || Sbjct 173071 CAGAAAGAGTCAACGCTTCACCT 173093 Score = 118 bits (130), Expect = 3e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || |||||||| || ||||| || || ||| Sbjct 173170 CAGATCTTCGTGAAAACACTGACTGGCAAGACGATCACTCTGGAGGTTGAGTCGTCGGAC 173229 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || |||||||| ||||| ||||||||||| || || || || Sbjct 173230 ACTATTGATAACGTGAAGGCGAAGATTCAAGACAAGGAAGGAATCCCCCCTGATCAACAG 173289 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||| | || ||||| | ||| | | ||||| || | Sbjct 173290 CGTCTGATCTTCGCAGGGAAGCAGTTGGAGGATGGCCGAACTTTGTCGGATTACAATATT 173349 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 173350 CAGAAGGAGTCGACGCTTCACCTTG 173374 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| || || || |||||||||||||| || ||| ||| Sbjct 172610 CAGATTTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGAC 172669 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 || ||||| ||||||||| ||||| |||||||| || || Sbjct 172670 ACAATCGACAACGTCAAAGCGAAGATCCAGGACAAGGAGGG 172710 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 ||||||| || ||||| || || |||||||||||||| || |||||||| || || | | Sbjct 172763 GAATCCCCCCTGACCAACAGCGCCTTATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTA 172822 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || | ||||| ||| |||| || ||||| || || || ||||| Sbjct 172823 CGCTGTCAGATTACAACATCCAGAAGGAATCCACTCTTCACCTTGT 172868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203717920964034