Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq173 143 3e-29 seq6 107 2e-18 >seq173 Length=183199 Score = 143 bits (158), Expect = 3e-29 Identities = 293/433 (68%), Gaps = 2/433 (0%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 ||| ||||| || ||| || | |||||||| | |||||| || ||||| || || || Sbjct 161393 CAGGCATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGT 161334 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | |||||||| || || ||||| | ||| || || | || || || || || || Sbjct 161333 GAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAA 161274 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTT 17139 ||| || |||||||||| ||||| |||| | ||||| ||| | || | | | | | Sbjct 161273 GAAGATGCCCTCGACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGGTGGACT-TGTCAT 161215 Query 17140 ACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGG 17198 || ||||| ||| |||| ||||| || | ||| |||||| || || || | || Sbjct 161214 CTGAGATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGG 161155 Query 17199 CCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGT 17258 | | || | | ||| | | |||| | || || || |||||||| ||| || Sbjct 161154 CGTCGAAGAGGTACTCGCGCTGCACGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGT 161095 Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318 | | |||||||| ||||||||||| ||||| || ||||| ||||| ||||| || | Sbjct 161094 AGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGG 161035 Query 17319 CTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378 | ||| || || |||| || || | || || ||||| ||||| || ||| || Sbjct 161034 CGGCTTGGACCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACG 160975 Query 17379 CGGCGAAAAACGC 17391 | ||||| || || Sbjct 160974 CAGCGAAGAAGGC 160962 >seq6 Length=777208 Score = 107 bits (118), Expect = 2e-18 Identities = 263/395 (67%), Gaps = 19/395 (5%) Strand=Plus/Minus Query 16945 AAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAG 17004 |||||| | | || || |||||| ||||| ||| | ||||| ||||| ||||| || Sbjct 82594 AAGATGCCTGAGCAGCAAACATGCAAAATCTGTATGCATGCCCTCATCTCTACTGATGAG 82535 Query 17005 TTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGC 17064 |||||| ||||| ||||| ||||||||| ||| || ||||| | ||| |||| ||||| Sbjct 82534 TTCGTTGGAAAACGTCAAACCGGGCATCAATCCCCGCTTCTTCAGCCAGTATATGGCGGC 82475 Query 17065 GAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTA 17124 ||| || || || ||||| |||||||| || || || || || | ||| | | Sbjct 82474 GAAAGAGCCTGAGAAGAAAATACCCTCCACCACCGCGAAAGCTATCAGACGTGTTTTGAA 82415 Query 17125 CGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTAT----GC 17180 || | || | || ||||| || ||||| | ||||| | || | Sbjct 82414 CGG---GATTTCGCGACTGATCCAACGTAGCGCCCACGCTGCTTTGTCTCGAATAGACGG 82358 Query 17181 AATCCATCGTTTCTATGGCCTTAAATAATTTC----TCTTTTTCCTGTAGGTCGATTATA 17236 || || || ||| | | || | ||| | ||| | | |||| || Sbjct 82357 AAAACAC----TCGGCGGCGCTCAGTAGGTGAAGCTTCTCATCCCTATCGA-CGATGAT- 82304 Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296 ||| |||||||| || |||||| || || |||||||||||||| || |||||||| Sbjct 82303 --CGTGTCGATGAGGAGCGAGTACATCTCAGAATGTATGTTCTCCATCGCAATCTGAAAC 82246 Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 || || ||||| || || |||| ||| || ||||| Sbjct 82245 CCATAGAAGCACCGAGCCTCCGGTATCTGCACTTC 82211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517533217721520