Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335.
1_202016-04-25] 1,914 sequences; 95,118,143 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 2e-17
>seq6
Length=777208
Score = 104 bits (114), Expect = 2e-17
Identities = 127/168 (76%), Gaps = 8/168 (5%)
Strand=Plus/Minus
Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
|||||| || || ||||||||||| || || |||||||| ||||||||||| ||||||||
Sbjct 82285 GTACATCTCAGAATGTATGTTCTCCATCGCAATCTGAAACCCATAGAAGCACCGAGCCTC 82226
Query 16555 CGCTATTTGTACTTC-CACG-TAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612
|| ||| || ||||| ||| || ||| || | ||||||||| ||||| || |||
Sbjct 82225 CGGTATCTGCACTTCAGACGCGAACATC--TCGACGAGGTTCTCAACGACGATGCCATCA 82168
Query 16613 CTTGCAGCAAAAAACGCCAATAT--GTGCTTAATGAAATATTTTTCGT 16658
||| |||||||| | | ||| ||| | ||||| || ||||||
Sbjct 82167 GATGCGGCAAAAAAACCGAGTATCCGTGAT--ATGAAGAATCTTTCGT 82122
Score = 86.0 bits (94), Expect = 6e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 16223 CCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTC 16282
|| || ||||| ||||| |||||||||||||| || || || ||||| ||| || |||
Sbjct 82554 CCCTCATCTCTACTGATGAGTTCGTTGGAAAACGTCAAACCGGGCATCAATCCCCGCTTC 82495
Query 16283 TTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAAC 16332
|| | |||| |||| || || || || || || ||||| |||||||| ||
Sbjct 82494 TTCAGCCAGTATATGGCGGCGAAAGAGCCTGAGAAGAAAATACCCTCCAC 82445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511402164410480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |