Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq173 125 8e-24 seq6 102 1e-16 >seq173 Length=183199 Score = 125 bits (138), Expect = 8e-24 Identities = 177/248 (71%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 ||||| || ||| ||| | |||||||| | || || | |||||||| || ||||| Sbjct 161389 CATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGG 161330 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| || || ||||| || ||||| || ||||||||||| || || || ||||| Sbjct 161329 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAG 161270 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT--- 24311 || || || || || |||||||| | || | ||| | | || |||||| | Sbjct 161269 ATGCCCTCGACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGGTGGACTTGTCATCTGAG 161210 Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371 |||||||| ||||| ||||||||||| || | ||||| || ||||| | || | Sbjct 161209 ATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCG 161150 Query 24372 AAGAGATA 24379 ||||| || Sbjct 161149 AAGAGGTA 161142 >seq6 Length=777208 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24128 CATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAA 24187 || ||||||||| ||||| || | ||||| |||||||| || | |||||||||||| Sbjct 82582 CAGCAAACATGCAAAATCTGTATGCATGCCCTCATCTCTACTGATGAGTTCGTTGGAAAA 82523 Query 24188 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGA 24247 ||| | |||||||| | || ||||| || ||||| |||||| || || || || || Sbjct 82522 CGTCAAACCGGGCATCAATCCCCGCTTCTTCAGCCAGTATATGGCGGCGAAAGAGCCTGA 82463 Query 24248 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 24283 |||||||| || || || |||| || || || || Sbjct 82462 GAAGAAAATACCCTCCACCACCGCGAAAGCTATCAG 82427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593707395210720