Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq114 134 1e-26 seq174 132 4e-26 seq49 102 7e-17 seq4 86.0 5e-12 seq41 82.4 7e-11 >seq114 Length=262464 Score = 134 bits (148), Expect = 1e-26 Identities = 157/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 ||||||| |||| || ||| || ||||||||||| ||||||| |||||| |||| Sbjct 228495 CACCAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCT 228554 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||||||| || || ||| ||||||| |||||||| ||||| || |||||||||||||| Sbjct 228555 CGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCT 228614 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | |||| |||||| | ||||||||||| || | || | Sbjct 228615 GGATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCT 228674 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||||| || || || || || || ||||| Sbjct 228675 TGCCGGTGAGGGTCTTGACGAAGATTTGCAT 228705 Score = 107 bits (118), Expect = 2e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| |||||||| || || |||||||| || | ||||| ||||| ||||| Sbjct 228731 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGC 228790 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| ||||| || ||||| || ||||||||||| || || || Sbjct 228791 TTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTG 228850 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| ||||||| ||||||||| | || | || |||||||| Sbjct 228851 GCCTTGACGTTGTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTG 228910 Query 118716 AGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || ||||| ||||||||| || Sbjct 228911 AGGGTCTTGACAAAGATCTGCATGCCT 228937 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||||||| || ||||| |||||| Sbjct 229234 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGGCCATCCTC 229293 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 |||||| || || ||| |||| ||||||||||| ||||| || |||| Sbjct 229294 GAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGGTCGGGGGGGATGC 229340 >seq174 Length=181799 Score = 132 bits (146), Expect = 4e-26 Identities = 156/210 (74%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| || | || ||||| || || |||||||| ||| | |||||| |||||| Sbjct 45606 ACCAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 45665 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| ||||||| ||||| ||||||||||| |||||||||||||| Sbjct 45666 AAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTG 45725 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||||| ||||||||||| ||| | ||| || Sbjct 45726 GATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTT 45785 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || || || |||||||| Sbjct 45786 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 45815 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| || ||||||||||| | ||||| ||||||||||||||| || Sbjct 45110 GTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCCTCGAGCTGTTTGCCG 45169 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| |||||||| || |||||||| |||||||||||||| ||| || || Sbjct 45170 GCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 45229 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | ||||||||||| || | || ||||| || || || Sbjct 45230 ACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTAAGCGTC 45289 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 45290 TTGACAAAGATCTGCAT 45306 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || || ||||| ||| | ||||| |||||||||||| Sbjct 45331 GTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGTCCATCCTCGAGCTG 45390 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || ||||| ||||||||||||| || || ||||| ||||||||||| || ||| || Sbjct 45391 CTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTT 45450 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 | || || | |||| |||||| | | || ||||||| ||| | || ||||| || Sbjct 45451 TGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACCTCGAGGGTAATGGTCTTGCCCGT 45510 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || || ||||| Sbjct 45511 CAGGGTCTTGACGAAGATTTGCAT 45534 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 ||||||| | || || || ||||| ||||||||||| | || || |||||||| Sbjct 44871 CCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGA 44930 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| || || ||| |||| ||||||||||| |||||||| || |||||||| || | Sbjct 44931 GCTGCTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGA 44990 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | || | ||||||| ||||||||| | ||| | || || | Sbjct 44991 TCTTCGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTC 45050 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||||||||| Sbjct 45051 CCGTTAGGGTCTTAACGAAAATCTGCAT 45078 >seq49 Length=440159 Score = 102 bits (112), Expect = 7e-17 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| ||||| |||||||| ||||||| ||||| ||||||| Sbjct 335866 ACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGCTCAGTGTGCGTCCATCCTCG 335925 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| || ||||| |||||||||||||||| ||||| || || Sbjct 335926 AGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGGAT 335969 >seq4 Length=859135 Score = 86.0 bits (94), Expect = 5e-12 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 118603 CGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAA 118662 || ||||||| ||||| || ||||| || |||||||||||||| || || ||| | Sbjct 830440 CGAAGATGAGGCGCTGTTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCTTTGA 830381 Query 118663 CCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG-CCGGTCAGAGTT 118721 | | |||| |||||||| | ||||||||| | || || || ||| | ||| ||||| Sbjct 830380 CATTGTCGATGGTGTCCGAGGACTCGACCTCAAGCGTGACTGTCTTGTCGGGTGAGAGTC 830321 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 830320 TTGACGAAGATCTGCAT 830304 >seq41 Length=470795 Score = 82.4 bits (90), Expect = 7e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||||| || || |||||||| ||| | ||||| ||| || Sbjct 242671 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTC 242730 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 |||||| || || ||| |||| ||||||||||| |||||||| || Sbjct 242731 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAAT 242775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433820280092488