Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq114 140 2e-28 seq174 105 4e-18 >seq114 Length=262464 Score = 140 bits (154), Expect = 2e-28 Identities = 159/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 34179 GCACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 |||||| |||| | || || || ||||| |||||||||||| |||| || |||| Sbjct 228494 GCACCAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCC 228553 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| |||||||||||| ||| | || ||||||||| Sbjct 228554 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 228613 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | ||| ||||| || | ||||||||| Sbjct 228614 TGGATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTC 228673 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||| ||||| Sbjct 228674 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 228705 Score = 134 bits (148), Expect = 9e-27 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || || || | |||| || ||||| ||||||||||| || || ||| |||| Sbjct 228722 AGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 228781 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||||||||| ||||| ||||| ||||| |||||| ||| | || |||||| || Sbjct 228782 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCC 228841 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | ||| ||||| || | ||||||||| Sbjct 228842 TGGATCTTGGCCTTGACGTTGTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTC 228901 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || |||||||||||||| Sbjct 228902 TTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 228933 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||||| ||| | || || ||||| |||||||| |||||| Sbjct 229217 CCTCCACGCAGACGGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 229276 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| ||||| || || |||||||||||| ||| Sbjct 229277 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGGTCGGGGGGG 229336 Query 34283 ACGCT 34287 | ||| Sbjct 229337 ATGCT 229341 >seq174 Length=181799 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || ||| | || || | ||||||||| ||||| Sbjct 45625 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 45684 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||| || ||| || | || ||||||||| ||||| ||| | | | Sbjct 45685 ATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 45744 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| || | ||||| || ||||| ||||| || || || Sbjct 45745 TCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACG 45804 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 45805 AAGATCTGCAT 45815 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | ||| || || || | ||| |||||||| |||||||| || || Sbjct 45079 TCCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGA 45138 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| || | || || | ||| ||||| || || || || ||||| |||||| || Sbjct 45139 GAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGG 45198 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 45199 GATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGAC 45258 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| || || || || |||||||||||||| Sbjct 45259 CTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || || ||||| | ||| || ||||| || ||||||||||| Sbjct 45308 CCACCACGCAGACGAAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGAA 45367 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || || | ||||||||| || || ||||| ||||| ||||| || Sbjct 45368 AGCGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGG 45427 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || |||||| ||| | | | | || | |||| ||||| || Sbjct 45428 ATGCCCTCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACC 45487 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | || ||||| ||||| || || || || || ||||| ||||| Sbjct 45488 TCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 45534 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34182 CCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCA 34241 ||| ||| | ||| ||| || || |||||||| || || || ||| | || || | Sbjct 44871 CCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGA 44930 Query 34242 ACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTA 34301 |||||| |||||||| || || |||||||||||| || | | |||||| || | Sbjct 44931 GCTGCTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGA 44990 Query 34302 TCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGC 34361 |||| ||| | | | | |||| || | ||| ||||| || | |||||||| || | Sbjct 44991 TCTTCGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTC 45050 Query 34362 CGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || || || || || || |||||||| Sbjct 45051 CCGTTAGGGTCTTAACGAAAATCTGCAT 45078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323064463739840