Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq173 87.8 4e-12 >seq173 Length=183199 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 ||| |||| || | |||||||| |||||||||||||||||||| || ||||||||||| Sbjct 158796 GTAGTCGGAGACGCGTTTCTCAAAGAAGTTGGTCTTTCCCTGGAGCGAGATCATGTCCAT 158855 Query 157318 CCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGT- 157376 | || || || |||| | ||| ||| | ||||||| || ||| | || ||| Sbjct 158856 GAAATCAAACGGATTGGTGGAGTGGTAGAGTTTGTCGTTGCCGAGCGAGACTAG-GAGTC 158914 Query 157377 AGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGA 157436 ||| || || |||| |||||||| | ||| || | | || || ||||| ||| Sbjct 158915 TGTCAGCTACGAACTCGATGTACTGTCGCATTAATTTTGCATTCATGCCAATGAGACCGA 158974 Query 157437 CGGGAAGCGC 157446 | || ||||| Sbjct 158975 CAGGCAGCGC 158984 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 ||| || | ||| | ||||| || ||||| ||||| ||||| || || ||||||||||| Sbjct 161675 GTAGTCCGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCATGTCCAT 161616 Query 157318 CCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTA 157377 | ||||| ||||| | | ||||||||||||||||| || || ||| | Sbjct 161615 GAAGTCGAAGGGGTTCGTGACGTTGTACACCTTGTCGTTTCCGAGGGACACGAGCAGGCG 161556 Query 157378 GTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCG-A 157436 |||||| || |||| |||||||| |||| | | | | || ||||||||| | | Sbjct 161555 GTCCGCGACGAACTCGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAGCTTGCA 161496 Query 157437 CGGGAAGCGC 157446 |||| ||||| Sbjct 161495 CGGG-AGCGC 161487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073740067892352