Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq114 127 2e-24 seq174 122 7e-23 >seq114 Length=262464 Score = 127 bits (140), Expect = 2e-24 Identities = 155/210 (74%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 45128 ACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 |||||| || |||||||||||||||||||||||||||||| |||| ||| |||| || Sbjct 228496 ACCAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTC 228555 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || || |||||||| || | ||||| |||||||| || | |||||||||||| Sbjct 228556 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 228615 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | |||| ||| ||||| | || || ||||| Sbjct 228616 GATCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTT 228675 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || || ||||| || ||||||||||| Sbjct 228676 GCCGGTGAGGGTCTTGACGAAGATTTGCAT 228705 >seq174 Length=181799 Score = 122 bits (134), Expect = 7e-23 Identities = 155/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 45126 ATACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 |||||||| |||||||| ||||||||| |||||||||||| || ||| | || Sbjct 45604 ATACCAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 45663 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||||||| || | |||||||| |||||||| | |||||||||||| Sbjct 45664 TCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCC 45723 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | ||||| | ||| ||||| | ||| |||||| Sbjct 45724 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTC 45783 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| || ||||| || ||||| ||||| Sbjct 45784 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 45815 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||| || ||||||||| || ||| | || || || || Sbjct 45331 GTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGTCCATCCTCGAGCTG 45390 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || || || || | ||||||||||| ||||| | |||||||| ||| ||| || Sbjct 45391 CTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTT 45450 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 | ||| || | | | |||| || ||||| | |||||| ||||||||||| Sbjct 45451 TGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACCTCGAGGGTAATGGTCTTGCCCGT 45510 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 ||| ||||| || ||||||||||| Sbjct 45511 CAGGGTCTTGACGAAGATTTGCAT 45534 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 ||||| ||| ||| ||||| |||||||| || || |||| | || || || ||| Sbjct 45104 TGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCCTCGAGCTGT 45163 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || ||||| || || | ||||||||||||||||| | |||||||||||| ||| || Sbjct 45164 TTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTC 45223 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| ||| ||||| | || || |||||||| || Sbjct 45224 GCCTTCACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTA 45283 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 || ||||| |||||||| ||||| Sbjct 45284 AGCGTCTTGACAAAGATCTGCAT 45306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395065984130194