Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq173 116 5e-21 seq6 96.9 4e-15 seq362 89.7 6e-13 >seq173 Length=183199 Score = 116 bits (128), Expect = 5e-21 Identities = 175/248 (71%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 ||||| || ||| ||||| |||||||| | || || | ||||| || || ||||| Sbjct 161389 CATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGG 161330 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || || ||||| || ||||| || ||||| || || || || || |||||| Sbjct 161329 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAG 161270 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 33758 || || || || || |||||||| | || | || | | || |||||| | Sbjct 161269 ATGCCCTCGACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGGTGGACTTGTCATCTGAG 161210 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 |||||||| ||||| ||||||||||| || | ||||| || || || | ||| | Sbjct 161209 ATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCG 161150 Query 33819 AAGAGATA 33826 ||||| || Sbjct 161149 AAGAGGTA 161142 >seq6 Length=777208 Score = 96.9 bits (106), Expect = 4e-15 Identities = 377/580 (65%), Gaps = 22/580 (4%) Strand=Plus/Minus Query 33575 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAA 33634 || ||||||||| ||||| |||| ||||| |||||||| || | |||||| ||||| Sbjct 82582 CAGCAAACATGCAAAATCTGTATGCATGCCCTCATCTCTACTGATGAGTTCGTTGGAAAA 82523 Query 33635 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGA 33694 ||| | |||||||| | || ||||| || ||||| |||||| ||||| || || || Sbjct 82522 CGTCAAACCGGGCATCAATCCCCGCTTCTTCAGCCAGTATATGGCGGCGAAAGAGCCTGA 82463 Query 33695 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG----CGC 33750 ||||| || || || || | || || || || || | | | ||| || ||| Sbjct 82462 GAAGAAAATACCCTCCACCACCGCGAAAGCTATCAGACG-TGTTTTGAACGGGATTTCGC 82404 Query 33751 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33810 | | || ||||| | | ||||| | || || | | | | | || | || Sbjct 82403 -GAC-TG-ATCCAACGTAGCGCCCACGCTGCTTTGTCTCGAATAGACGGAAAACACTCGG 82347 Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAA--GTATCGATCAAAAG 33868 ||| | | || | || |||| ||||| | || | || ||||| | || Sbjct 82346 CGGCGCTCAGTAGGTGAAGCTTCTCATCCCTATCG--ACGATGATCGTGTCGATGAGGAG 82289 Query 33869 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33928 ||||| || ||||| ||||| || || || |||||||| || ||||| || | ||| Sbjct 82288 CGAGTACATCTCAGAATGTATGTTCTCCATCGCAATCTGAAACCCATAGAAGCACCGAGC 82229 Query 33929 CTCGGTAATCTGCACTTCTGTAC---AAAATCGTTCTGCTAAATTTTCATTCACTATTCC 33985 ||| | ||||||||||| | || || ||| || | | || ||| || || || Sbjct 82228 CTCCGGTATCTGCACTTCAG-ACGCGAACATC--TCGACGAGGTTCTCAACGACGATGCC 82172 Query 33986 ATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG 34045 |||| || |||||||| | | || || ||| || || |||||| | || | Sbjct 82171 ATCAGATGCGGCAAAAAAACCGAGTATCCGTGATATGAAGAATCTTTCGTTCGCCGTCAT 82112 Query 34046 TT---TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 34102 || | |||| || | |||| || || | || ||||| ||| | |||||||| || Sbjct 82111 TTTGGTCGTCCAGTCGTGTCTATCCTTGGACAAGTCGACTTCCTCCGCAGTCCAAAACGA 82052 Query 34103 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATAT 34142 ||||| ||| || ||||| | ||| || | | ||||| Sbjct 82051 TGCCTGTGCACGCTTGTACATCTCCCATATCT-AAGATAT 82013 >seq362 Length=48712 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/248 (68%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 ||||| || ||| ||||| |||||||| | || || | ||| | || || ||||| Sbjct 45940 CATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGGTGGAGAAGGTGAGG 45999 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || || || || || ||||| || || || ||||| || || || || ||| Sbjct 46000 CCGGGCATGAGACCGCGTTTCTTGAGCCAGAAGATCGATGCGAAGGAGCCCGAGAAAAAG 46059 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 33758 || || | || | ||||||| | || | ||| | | || |||||| | Sbjct 46060 ATGCCCTTGACGGTGACAAAGGCGACGAGGCGCTCAGCGAAGGTGGACTTGTCATCTGAG 46119 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 |||||||| ||||| ||||||||||| || | || || || || || | ||| | Sbjct 46120 ATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGACGGCGTCG 46179 Query 33819 AAGAGATA 33826 ||||| || Sbjct 46180 AAGAGGTA 46187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629802531613920