Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq114 96.9 3e-15 seq173 87.8 2e-12 seq174 86.0 6e-12 >seq114 Length=262464 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || |||||||| || ||||||| |||| | ||| |||||||| || || || | Sbjct 228514 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAA 228573 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 ||| || || ||||| ||||| || ||||| || ||||| ||| || || | | Sbjct 228574 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATT 228633 Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752 || | ||||| | | ||| ||||| | || | ||||||||||| | || || || Sbjct 228634 GTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGAC 228693 Query 139753 GAATATTTGCATAGCT 139768 ||| ||||||||| || Sbjct 228694 GAAGATTTGCATACCT 228709 >seq173 Length=183199 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 52564 AAAAAGGATGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGT 52623 || |||| || ||||| |||| |||||| | | ||||| |||| || || ||||| Sbjct 161181 AAGAAGGCCGACTGGGCCATGAAGTGGATCTCAGATGACAAGTCCACCTTCGCTGAACGC 161240 Query 52624 CTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTT 52683 || ||||| ||||| || || || | || || ||||| |||||| | || || Sbjct 161241 CTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCGTCCATCTTC 161300 Query 52684 TACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCG 52742 | |||| || | || | | |||||||||||||| || ||||||| | || || Sbjct 161301 TGGCTCAAGAAGCGCGGTC-TCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCG 161359 Query 52743 CGACGAAGGAATGCACACAGATTTTGCGTG 52772 |||||| || |||||||| || ||||| || Sbjct 161360 CGACGAGGGGATGCACACCGACTTTGCATG 161389 >seq174 Length=181799 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| || ||||| ||||| | |||| || ||||||||||| || Sbjct 45110 GTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCCTCGAGCTGTTTGCCG 45169 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| |||| ||||| || || |||||||| ||||| || ||||| ||| | || | || Sbjct 45170 GCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTC-CTGAATCTTCGCCTT 45228 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | ||||||| | ||| ||||| | || | |||||||| || | ||| Sbjct 45229 CACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTAAGCGT 45288 Query 139747 TTTTACGAATATTTGCATA 139765 || || || || |||||| Sbjct 45289 CTTGACAAAGATCTGCATA 45307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496052131668800