Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335.
1_202016-04-25] 1,914 sequences; 95,118,143 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq173 248 1e-60
seq362 170 3e-37
>seq173
Length=183199
Score = 248 bits (274), Expect = 1e-60
Identities = 567/846 (67%), Gaps = 27/846 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| || || ||||| | || ||| | || |||
Sbjct 160833 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGGAGATGGACCTG 160892
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||| || || ||| | || | | || | || || | || || ||
Sbjct 160893 TCCAAGGACATGGTTGACTGGAACACCAAGCTCAACGACAACGAACGTCACTTCATCTCC 160952
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | |||||||| || | |||||||| ||||||||||| || || ||||| ||
Sbjct 160953 CACGTCCTCGCCTTCTTCGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTTGAG-CG 161011
Query 125198 ATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255
||||| | ||| | ||| || |||| ||||| ||||| ||||| ||||||
Sbjct 161012 GTTCTCGAACGAGGT--CCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 161069
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314
|| |||||| | ||||| || | ||||| || || |||| ||||| || ||
Sbjct 161070 ATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGACCCC 161129
Query 125315 --GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372
||| || | || ||||| |||| |||| || | || | || || |||
Sbjct 161130 GTGCAGCGCGAGTAC---CTCTTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAG 161186
Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432
|| | |||| || ||||||| || |||||||| | | ||| || | || ||
Sbjct 161187 GCCGACTGGGCCATGAAGTGGATCTCAGATGACAAGTCCACCTTCGCTGAACGCCTCGTC 161246
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || |||||||| |||||||||||||| ||||| |||||| ||||||| ||||||
Sbjct 161247 GCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCGTCCATCTTCTGGCTC 161306
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
||||||||||| ||||||||||| || || | |||||| | || || ||||||
Sbjct 161307 AAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCGACGAG 161366
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGA 125612
|| | ||| |||||||| || || || || || ||| ||| | |||
Sbjct 161367 GGGATGCACACCGACTTTGCATGCCTGCTCTTCAGCCACCTCAAGCG--CCGCGCGCA-- 161422
Query 125613 TCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672
| || | ||| | ||| | || || ||||| || || || |||||
Sbjct 161423 -----CCCCGACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATCGAGCAGGAGTTC 161477
Query 125673 CTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTAC 125732
|| || ||| | || ||| || | || |||||||||| | || |||||| |||||
Sbjct 161478 CTCACGGAAGCGCTCCCGTGCAAGCTCATCGGCATGAACTCGGACCTCATGTGCCAGTAC 161537
Query 125733 ATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAAC 125789
|| ||||| || || || || || || || || | || | |||| | ||||||
Sbjct 161538 ATCGAGTTCGTCGCGGACCGCCTGCT---CGTGTCCCTCGGAAACGACAAGGTGTACAAC 161594
Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849
| || ||| ||||| || |||||| || || || || |||| ||||| ||||| |||
Sbjct 161595 GTCACGAACCCCTTCGACTTCATGGACATGATCTCCCTGCAGGGCAAGACGAACTTCTTC 161654
Query 125850 GAGAAG 125855
||||||
Sbjct 161655 GAGAAG 161660
Score = 178 bits (196), Expect = 2e-39
Identities = 393/584 (67%), Gaps = 8/584 (1%)
Strand=Plus/Minus
Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053
||| || ||||| || ||||| |||||| | ||||| ||||| || ||||||||
Sbjct 159731 CCTCTTCCCCATACAATACCATGAAATTTGGTCCCTCTACAAGAAGGCCCAAGCCTCCTT 159672
Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113
|||||| | ||| || | || || || ||| | | ||||| || || | ||
Sbjct 159671 TTGGACCGCCGAGGAAATGGACCTCTCGCTCGACATACAGCATTGGCGCACCCGCCTAAC 159612
Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173
| |||||| | ||||| |||||| | | |||||||| |||| ||| || || ||
Sbjct 159611 CCCTAATGAGCGGCACTTTATCTCGCACGTCCTTGCCTTCTTCGCCGCCTCGGACGGCAT 159552
Query 125174 CGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT 125232
||| ||||| || || ||||| || || || | ||| | | | | || | | ||
Sbjct 159551 CGTGAACGAGAACCTCGTTGA-GCGCTTTTCGAACGAGGTCAAGGTCGCCGAAGCGCGGT 159493
Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292
|||| ||||| | || |||||| | |||||||| ||||| || | ||||| || |
Sbjct 159492 GCTTCTACGGCTATCAGATCATGGTCGAGAACGTCCACTCCGAGACATACTCCCTCCTCA 159433
Query 125293 TTGACATGTACATTCGCGA-TCCGC--AACGTAAACACATGCTCTTTAACGCAATCGACA 125349
| |||| | || | || || || | ||| || || || ||||||| || |
Sbjct 159432 TCGACACGCTGATCCAGGACTCGGCCGAGCGTGCGTACTTG---TTCCACGCAATAGAGA 159376
Query 125350 CGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT 125409
| | |||| ||| || ||||| | |||| | ||||||||| |||| |
Sbjct 159375 CCATCCCGTGTATCAAGAAGAAGGCGGAGTGGGCCCTCCGGTGGATCTCCGACGCGCGCT 159316
Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469
| ||| ||| || ||||||| || |||||||| || |||||||| ||||| |||||
Sbjct 159315 CGACGTTCGCGGAGCGACTGGTAGCGTTCGCCGCGGTCGAGGGCATTTTCTTCTCGGGCT 159256
Query 125470 GTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTA 125529
||||| ||| || ||||| |||||||| || || |||||||| || || | |
Sbjct 159255 CCTTTGCAAGCATTTTCTGGCTGAAGAAGCGTGGGCTGATGCCCGGGCTAACATTCTCCA 159196
Query 125530 ACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573
||||| | ||| ||| |||||||| | || ||||||||||
Sbjct 159195 ACGAGCTGATAAGTCGGGACGAGGGGATGCATACTGACTTTGCC 159152
>seq362
Length=48712
Score = 170 bits (188), Expect = 3e-37
Identities = 554/846 (65%), Gaps = 32/846 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| || || ||||| | || || | || |||
Sbjct 46493 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGAAGATGGACCTG 46434
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||| || ||| ||| | || | | | || | || || | || || ||
Sbjct 46433 TCCAAGGACATGGTCGACTGGAACACCCAGCTCAACGACAACGAACGTCACTTCATCTCC 46374
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | |||||||| || | || ||| | ||||||||||| || || ||||| ||
Sbjct 46373 CACGTCCTCGCCTTCTTCGCTGCGTCGGATAGCATCGTCAACGAGAACCTCGTTGAG-CG 46315
Query 125198 ATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255
||||| | ||| | ||| || |||| ||||| ||||| ||||| | ||||
Sbjct 46314 GTTCTCGAACGAGGT--CCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGACCATG 46257
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315
|| || | | | ||||| || | ||||| || ||||| | ||||| || ||
Sbjct 46256 ATGGACACCATTCACTCCGAGACCTACTCC---CTCATTGATACCTACATCACGGACCCC 46200
Query 125316 ---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372
|| || | || ||||| |||| |||| || | |||| || || |||
Sbjct 46199 GCACAGCGCGAGTAC---CTCTTCGACGCCGTCGAGACCATCCCGTGCATCAAGAAGAAG 46143
Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432
|| | |||| || ||||||| || |||||||| | | ||| || | || ||
Sbjct 46142 GCCGACTGGGCCATGAAGTGGATCTCAGATGACAAGTCCACCTTCGCTGAGCGCCTCGTC 46083
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || | | |||| |||||||||| || ||||| || || | ||||| ||||||
Sbjct 46082 GCCTTTGTCACCGTCAAGGGCATCTTTTTCTCGGGCTCCTTCGCATCGATCTTCTGGCTC 46023
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
||||| ||||| ||||||||||| || || | | |||| | || || ||||||
Sbjct 46022 AAGAAACGCGGTCTCATGCCCGGCCTCACCTTCTCCACCGAGCTCATCAGCCGCGACGAG 45963
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGA 125612
|| | ||| |||||||| || || || || || || | | ||| | || |
Sbjct 45962 GGGATGCACACCGACTTTGCATGCCTGCTCTTCAGCCAC-CTC-GAGCACCGCGCGC--A 45907
Query 125613 TCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672
||| || | ||| | ||| | || || ||||| || || || |||||
Sbjct 45906 TCC-----CGACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATTGAGCAGGAGTTC 45852
Query 125673 CTAACCGAATCCCTACCG-GTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTA 125731
|| || ||| || ||| || ||| | || |||||||||| | || |||||| ||||
Sbjct 45851 CTCACGGAAGTGCTCCCGTGTAAGC-TCATCGGCATGAACTCGGACCTCATGTGCCAGTA 45793
Query 125732 CATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAA 125788
||| |||| | || || || || || || || | || | |||| | |||||
Sbjct 45792 CATCAAGTTCTTCGCGGACCGCCTGCT---CGTGTCCCTCGGGAACGACAAGGTGTACAA 45736
Query 125789 CGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848
| || ||||||||||| ||| || | || || || |||| ||||| |||||| |
Sbjct 45735 TGTCACAAATCCCTTTGACTTCGTGGATATGATTTCCCTGCAGGGCAAGACGAACTTTCT 45676
Query 125849 CGAGAA 125854
||||||
Sbjct 45675 CGAGAA 45670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741041470158640
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