Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq173 248 1e-60 seq362 170 3e-37 >seq173 Length=183199 Score = 248 bits (274), Expect = 1e-60 Identities = 567/846 (67%), Gaps = 27/846 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | || ||| | || ||| Sbjct 160833 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGGAGATGGACCTG 160892 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| || || ||| | || | | || | || || | || || || Sbjct 160893 TCCAAGGACATGGTTGACTGGAACACCAAGCTCAACGACAACGAACGTCACTTCATCTCC 160952 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | |||||||| || | |||||||| ||||||||||| || || ||||| || Sbjct 160953 CACGTCCTCGCCTTCTTCGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTTGAG-CG 161011 Query 125198 ATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 ||||| | ||| | ||| || |||| ||||| ||||| ||||| |||||| Sbjct 161012 GTTCTCGAACGAGGT--CCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATG 161069 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC- 125314 || |||||| | ||||| || | ||||| || || |||| ||||| || || Sbjct 161070 ATGGAGAACATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGACCCC 161129 Query 125315 --GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 ||| || | || ||||| |||| |||| || | || | || || ||| Sbjct 161130 GTGCAGCGCGAGTAC---CTCTTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAG 161186 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || | |||| || ||||||| || |||||||| | | ||| || | || || Sbjct 161187 GCCGACTGGGCCATGAAGTGGATCTCAGATGACAAGTCCACCTTCGCTGAACGCCTCGTC 161246 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || |||||||| |||||||||||||| ||||| |||||| ||||||| |||||| Sbjct 161247 GCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCGTCCATCTTCTGGCTC 161306 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||||||||| ||||||||||| || || | |||||| | || || |||||| Sbjct 161307 AAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCGACGAG 161366 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGA 125612 || | ||| |||||||| || || || || || ||| ||| | ||| Sbjct 161367 GGGATGCACACCGACTTTGCATGCCTGCTCTTCAGCCACCTCAAGCG--CCGCGCGCA-- 161422 Query 125613 TCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672 | || | ||| | ||| | || || ||||| || || || ||||| Sbjct 161423 -----CCCCGACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATCGAGCAGGAGTTC 161477 Query 125673 CTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTAC 125732 || || ||| | || ||| || | || |||||||||| | || |||||| ||||| Sbjct 161478 CTCACGGAAGCGCTCCCGTGCAAGCTCATCGGCATGAACTCGGACCTCATGTGCCAGTAC 161537 Query 125733 ATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAAC 125789 || ||||| || || || || || || || || | || | |||| | |||||| Sbjct 161538 ATCGAGTTCGTCGCGGACCGCCTGCT---CGTGTCCCTCGGAAACGACAAGGTGTACAAC 161594 Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849 | || ||| ||||| || |||||| || || || || |||| ||||| ||||| ||| Sbjct 161595 GTCACGAACCCCTTCGACTTCATGGACATGATCTCCCTGCAGGGCAAGACGAACTTCTTC 161654 Query 125850 GAGAAG 125855 |||||| Sbjct 161655 GAGAAG 161660 Score = 178 bits (196), Expect = 2e-39 Identities = 393/584 (67%), Gaps = 8/584 (1%) Strand=Plus/Minus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053 ||| || ||||| || ||||| |||||| | ||||| ||||| || |||||||| Sbjct 159731 CCTCTTCCCCATACAATACCATGAAATTTGGTCCCTCTACAAGAAGGCCCAAGCCTCCTT 159672 Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113 |||||| | ||| || | || || || ||| | | ||||| || || | || Sbjct 159671 TTGGACCGCCGAGGAAATGGACCTCTCGCTCGACATACAGCATTGGCGCACCCGCCTAAC 159612 Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 | |||||| | ||||| |||||| | | |||||||| |||| ||| || || || Sbjct 159611 CCCTAATGAGCGGCACTTTATCTCGCACGTCCTTGCCTTCTTCGCCGCCTCGGACGGCAT 159552 Query 125174 CGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT 125232 ||| ||||| || || ||||| || || || | ||| | | | | || | | || Sbjct 159551 CGTGAACGAGAACCTCGTTGA-GCGCTTTTCGAACGAGGTCAAGGTCGCCGAAGCGCGGT 159493 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 |||| ||||| | || |||||| | |||||||| ||||| || | ||||| || | Sbjct 159492 GCTTCTACGGCTATCAGATCATGGTCGAGAACGTCCACTCCGAGACATACTCCCTCCTCA 159433 Query 125293 TTGACATGTACATTCGCGA-TCCGC--AACGTAAACACATGCTCTTTAACGCAATCGACA 125349 | |||| | || | || || || | ||| || || || ||||||| || | Sbjct 159432 TCGACACGCTGATCCAGGACTCGGCCGAGCGTGCGTACTTG---TTCCACGCAATAGAGA 159376 Query 125350 CGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT 125409 | | |||| ||| || ||||| | |||| | ||||||||| |||| | Sbjct 159375 CCATCCCGTGTATCAAGAAGAAGGCGGAGTGGGCCCTCCGGTGGATCTCCGACGCGCGCT 159316 Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469 | ||| ||| || ||||||| || |||||||| || |||||||| ||||| ||||| Sbjct 159315 CGACGTTCGCGGAGCGACTGGTAGCGTTCGCCGCGGTCGAGGGCATTTTCTTCTCGGGCT 159256 Query 125470 GTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTA 125529 ||||| ||| || ||||| |||||||| || || |||||||| || || | | Sbjct 159255 CCTTTGCAAGCATTTTCTGGCTGAAGAAGCGTGGGCTGATGCCCGGGCTAACATTCTCCA 159196 Query 125530 ACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 ||||| | ||| ||| |||||||| | || |||||||||| Sbjct 159195 ACGAGCTGATAAGTCGGGACGAGGGGATGCATACTGACTTTGCC 159152 >seq362 Length=48712 Score = 170 bits (188), Expect = 3e-37 Identities = 554/846 (65%), Gaps = 32/846 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | || || | || ||| Sbjct 46493 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGAAGATGGACCTG 46434 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| || ||| ||| | || | | | || | || || | || || || Sbjct 46433 TCCAAGGACATGGTCGACTGGAACACCCAGCTCAACGACAACGAACGTCACTTCATCTCC 46374 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | |||||||| || | || ||| | ||||||||||| || || ||||| || Sbjct 46373 CACGTCCTCGCCTTCTTCGCTGCGTCGGATAGCATCGTCAACGAGAACCTCGTTGAG-CG 46315 Query 125198 ATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 ||||| | ||| | ||| || |||| ||||| ||||| ||||| | |||| Sbjct 46314 GTTCTCGAACGAGGT--CCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGACCATG 46257 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 || || | | | ||||| || | ||||| || ||||| | ||||| || || Sbjct 46256 ATGGACACCATTCACTCCGAGACCTACTCC---CTCATTGATACCTACATCACGGACCCC 46200 Query 125316 ---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAG 125372 || || | || ||||| |||| |||| || | |||| || || ||| Sbjct 46199 GCACAGCGCGAGTAC---CTCTTCGACGCCGTCGAGACCATCCCGTGCATCAAGAAGAAG 46143 Query 125373 GCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 || | |||| || ||||||| || |||||||| | | ||| || | || || Sbjct 46142 GCCGACTGGGCCATGAAGTGGATCTCAGATGACAAGTCCACCTTCGCTGAGCGCCTCGTC 46083 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || || | | |||| |||||||||| || ||||| || || | ||||| |||||| Sbjct 46082 GCCTTTGTCACCGTCAAGGGCATCTTTTTCTCGGGCTCCTTCGCATCGATCTTCTGGCTC 46023 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 ||||| ||||| ||||||||||| || || | | |||| | || || |||||| Sbjct 46022 AAGAAACGCGGTCTCATGCCCGGCCTCACCTTCTCCACCGAGCTCATCAGCCGCGACGAG 45963 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGA 125612 || | ||| |||||||| || || || || || || | | ||| | || | Sbjct 45962 GGGATGCACACCGACTTTGCATGCCTGCTCTTCAGCCAC-CTC-GAGCACCGCGCGC--A 45907 Query 125613 TCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672 ||| || | ||| | ||| | || || ||||| || || || ||||| Sbjct 45906 TCC-----CGACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATTGAGCAGGAGTTC 45852 Query 125673 CTAACCGAATCCCTACCG-GTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTA 125731 || || ||| || ||| || ||| | || |||||||||| | || |||||| |||| Sbjct 45851 CTCACGGAAGTGCTCCCGTGTAAGC-TCATCGGCATGAACTCGGACCTCATGTGCCAGTA 45793 Query 125732 CATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAA 125788 ||| |||| | || || || || || || || | || | |||| | ||||| Sbjct 45792 CATCAAGTTCTTCGCGGACCGCCTGCT---CGTGTCCCTCGGGAACGACAAGGTGTACAA 45736 Query 125789 CGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848 | || ||||||||||| ||| || | || || || |||| ||||| |||||| | Sbjct 45735 TGTCACAAATCCCTTTGACTTCGTGGATATGATTTCCCTGCAGGGCAAGACGAACTTTCT 45676 Query 125849 CGAGAA 125854 |||||| Sbjct 45675 CGAGAA 45670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741041470158640