Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq174 105 6e-18 seq114 95.1 1e-14 >seq174 Length=181799 Score = 105 bits (116), Expect = 6e-18 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || |||||| | | |||| || | |||| ||| || || || || | | Sbjct 45068 AAAATCTGCATTCCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATG 45127 Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 || ||||| | || || || |||||| |||||||| ||| ||||||| | | | Sbjct 45128 TTGTAATCCG--AGAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCT 45185 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 | || || ||||| || || || ||||| | ||| || ||||| ||| | ||| |||| Sbjct 45186 GTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGT 45245 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | ||||| || | |||||||| || |||||||| || || ||||||||||||| Sbjct 45246 CGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCA 45305 Query 95007 T 95007 | Sbjct 45306 T 45306 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 94800 CCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 ||||||| | ||| ||||||||||| | ||| ||||| | || | |||||| | Sbjct 44871 CCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGA 44930 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||| || || | ||||| | | ||||| || ||||| ||||| || || || | | Sbjct 44931 GCTGCTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGA 44990 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || ||||||||| | | | ||||| | ||||| |||| |||||||| |||| Sbjct 44991 TCTTCGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTC 45050 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || || || |||||||| Sbjct 45051 CCGTTAGGGTCTTAACGAAAATCTGCAT 45078 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 94789 CAATCGCAACA--CCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT 94845 |||||| ||| ||||| |||| || || ||||| || | ||| || ||| | ||| Sbjct 45594 CAATCGAGACATACCAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 45653 Query 94846 GTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACC 94905 | | |||||| ||||| || ||| | ||||| | | || ||||| |||||||| || Sbjct 45654 GCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCC 45713 Query 94906 TTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAAT 94965 || ||||| | || || ||||||||| | ||| ||||| | ||||| || | Sbjct 45714 CTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAG 45773 Query 94966 CGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || || || || || ||||||||||| Sbjct 45774 GGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 45815 >seq114 Length=262464 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 |||||| ||||| || | ||| || || | ||| | ||||||||||| || || Sbjct 228736 AGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCC 228795 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 | | ||||| | | || || || || || || || || || || | || || ||||| Sbjct 228796 GGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTT 228855 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 |||| | ||| |||||| | ||||| |||| ||||||||| || || || || || Sbjct 228856 GACGTTGTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGT 228915 Query 94990 TTTCACAAAGATCTGCATGC 95009 || |||||||||||||||| Sbjct 228916 CTTGACAAAGATCTGCATGC 228935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448280474633040