Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq42 127 3e-25 seq14 127 3e-25 seq22 107 3e-19 seq48 82.4 1e-11 >seq42 Length=467958 Score = 127 bits (140), Expect = 3e-25 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 16482 AGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCT 16541 |||| || || || ||||| ||||| |||||||| ||||||||| |||| || | | | Sbjct 95591 AGCCCGCCATTCGCCGTCTTGCTCGCCGTGGTGGTGTCAAGCGTATCTCGGGTCTCATTT 95532 Query 16542 ATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGA-TGCTTTC 16600 | || || | |||| ||| | || ||||||||| ||| || || | ||| | | | Sbjct 95531 ACGAGGAAACCCGTGGTGTCCTCAAAATCTTCCTCGAGAATGTCATTCGTGACTCCGTGA 95472 Query 16601 CACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTG 16660 || || ||||||||||| || || |||||||||||||| | ||| | |||||||| ||| Sbjct 95471 CA-TACACCGAGCACGCAAAGCGCAAGACTGTCACCTCGCTTGATGTGGTCTATGCTTTG 95413 Query 16661 AAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || ||| |||||| | | | ||||| || || Sbjct 95412 AAGCGTTCAGGCCGCACGCTATATGGCTTCGG 95381 >seq14 Length=628858 Score = 127 bits (140), Expect = 3e-25 Identities = 144/192 (75%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 16482 AGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCT 16541 |||| |||||||| ||||| || |||||||| || ||||||||| |||| || | ||| Sbjct 323341 AGCCCGCTATCCGCCGTCTCGCACGTCGTGGAGGTGTCAAGCGTATCTCCGGCCTCATCT 323282 Query 16542 ATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCC 16601 | || |||| || | || | || ||||||||| ||| ||| |||| || | || Sbjct 323281 ACGAGGAGACCCGGGGCGTCCTCAAAATCTTCCTCGAGAACGTCATCCGCGACTCGGTCA 323222 Query 16602 ACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGA 16661 || ||||||||||| || || |||||||| || ||| | ||| ||||||| ||| ||| Sbjct 323221 CATACACCGAGCACGCAAAGCGAAAGACTGTTACATCCCTCGATGTCGTCTACGCACTGA 323162 Query 16662 AACG-TCAAGGC 16672 |||| ||| ||| Sbjct 323161 AACGATCAGGGC 323150 Score = 122 bits (134), Expect = 1e-23 Identities = 143/192 (74%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 16482 AGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCT 16541 |||| |||||||| ||||| || |||||||| || ||||||||| |||| || | ||| Sbjct 223147 AGCCCGCTATCCGCCGTCTCGCACGTCGTGGAGGTGTCAAGCGTATCTCCGGCCTCATCT 223206 Query 16542 ATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCC 16601 | || |||| || | || | || ||||||||| ||| ||| |||| || | || Sbjct 223207 ACGAGGAGACCCGGGGCGTCCTCAAAATCTTCCTCGAGAACGTCATCCGCGACTCGGTCA 223266 Query 16602 ACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGA 16661 || ||||||||||| || || ||||||||||| || | ||| ||||||| ||| ||| Sbjct 223267 CATACACCGAGCACGCAAAGCGAAAGACTGTCACATCTCTCGATGTCGTCTACGCACTGA 223326 Query 16662 AAC-GTCAAGGC 16672 | | |||| ||| Sbjct 223327 AGCGGTCAGGGC 223338 >seq22 Length=606995 Score = 107 bits (118), Expect = 3e-19 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| |||||||||||||| || |||||||| || ||||||||| |||| Sbjct 58435 AGGTATCACGAAGCCTGCTATCCGTCGTCTTGCCCGTCGTGGAGGTGTCAAGCGTATCTC 58376 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| | ||||||| |||| |||| |||| |||||||||| Sbjct 58375 TGGTCTCATCTATGAGGAGACCCGTGGTGTTCTGAAGATCTT 58334 >seq48 Length=451137 Score = 82.4 bits (90), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 ||||| || ||||| |||||||||||||| ||||||||| ||||||| | |||||||| Sbjct 134541 GCTATTCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGGCCTAATCTATGAA 134600 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| || | || | ||||||||| | ||| ||| Sbjct 134601 GAGACGCGCGGCGTCCTTAAGATCTTCTTGGAGAACGT 134638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073450016402