Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq6 100 3e-16 seq173 82.4 8e-11 >seq6 Length=777208 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 21469 CATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAA 21528 || ||||||||||||||| ||||| || ||||| ||||| || | ||| || ||||| Sbjct 82582 CAGCAAACATGCAAAATCTGTATGCATGCCCTCATCTCTACTGATGAGTTCGTTGGAAAA 82523 Query 21529 TGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGA 21588 || ||||||||||| ||||| | ||| || | ||| |||| | || || | ||||| Sbjct 82522 CGTCAAACCGGGCATCAATCCCCGCTTCTTCAGCCAGTATATGGCGGCGAAAGAGCCTGA 82463 Query 21589 AAAGAAAATGCCCTCAAC 21606 |||||||| ||||| || Sbjct 82462 GAAGAAAATACCCTCCAC 82445 >seq173 Length=183199 Score = 82.4 bits (90), Expect = 8e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 21466 AAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGA 21525 ||||| || || ||||| ||| ||||| || || |||| |||||| | || || || Sbjct 159140 AAACAACATGCAGGCAAAGTCAGTATGCATCCCCTCGTCCCGACTTATCAGCTCGTTGGA 159199 Query 21526 AAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCC 21585 ||||||| |||||||| | || | ||| || | ||| || || ||||| | || Sbjct 159200 GAATGTTAGCCCGGGCATCAGCCCACGCTTCTTCAGCCAGAAAATGCTTGCAAAGGAGCC 159259 Query 21586 TGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 || |||||||||||||| || || || || || || | ||| || Sbjct 159260 CGAGAAGAAAATGCCCTCGACCGCGGCGAACGCTACCAGTCGCTC 159304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531888074273360