Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq174 113 4e-20 seq114 93.3 3e-14 >seq174 Length=181799 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||| || | |||||| |||||||| || || |||||||| || | Sbjct 45080 CCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAG 45139 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||| | |||||||| ||| | ||||| ||||||||||| ||| Sbjct 45140 AGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGG 45199 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||| | | |||||| | | | | |||||| | ||| Sbjct 45200 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGACC 45259 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || || ||||| |||||||| |||||||| Sbjct 45260 TCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 16732 ATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTG 16791 ||||||||| |||||||| || ||||||||||||| | || | | ||||| | || Sbjct 45612 ATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTG 45671 Query 16792 TTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTG 16851 ||||| || | || || |||||||| || ||| | |||||| ||||| || | Sbjct 45672 CTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTT 45731 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | ||| || | | | | ||||| | ||| || | |||||| || || || || Sbjct 45732 CGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 45791 Query 16912 CAGCGTTTTGACAAAAATCTGCATT 16936 || || ||||| || ||||||||| Sbjct 45792 GAGGGTCTTGACGAAGATCTGCATT 45816 >seq114 Length=262464 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | ||| || || |||||||| || ||||||||||| | Sbjct 228707 CCTCCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 228766 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||||| || ||||| || | || || ||||||||||| || Sbjct 228767 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 228826 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| || || || || || ||| || | | | | |||||| | ||| Sbjct 228827 ATGCCCTCCTTATCCTGGATCTTGGC--CTTGACGTTGTCGATAGTGTCCGACGACTCGA 228884 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| || || |||||||| |||||||| Sbjct 228885 CCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 228933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405078550562860