Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq173 122 1e-22 seq6 102 1e-16 >seq173 Length=183199 Score = 122 bits (134), Expect = 1e-22 Identities = 176/248 (71%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 ||||| || ||| ||| | |||||||| | || || | |||||||| || ||||| Sbjct 161389 CATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGG 161330 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || || ||||| || ||||| || ||||||||||| || || || ||||| Sbjct 161329 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAG 161270 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 32837 || || || || || |||||||| | || | || | | || |||||| | Sbjct 161269 ATGCCCTCGACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGGTGGACTTGTCATCTGAG 161210 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||||| ||||| ||||||||||| || | ||||| || ||||| | || | Sbjct 161209 ATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCG 161150 Query 32898 AAGAGATA 32905 ||||| || Sbjct 161149 AAGAGGTA 161142 >seq6 Length=777208 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 32654 CATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAA 32713 || ||||||||| ||||| || | ||||| |||||||| || | |||||||||||| Sbjct 82582 CAGCAAACATGCAAAATCTGTATGCATGCCCTCATCTCTACTGATGAGTTCGTTGGAAAA 82523 Query 32714 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGA 32773 ||| | |||||||| | || ||||| || ||||| |||||| || || || || || Sbjct 82522 CGTCAAACCGGGCATCAATCCCCGCTTCTTCAGCCAGTATATGGCGGCGAAAGAGCCTGA 82463 Query 32774 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAG 32809 |||||||| || || || |||| || || || || Sbjct 82462 GAAGAAAATACCCTCCACCACCGCGAAAGCTATCAG 82427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633616840354400