Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq174 123 2e-23 seq114 107 2e-18 >seq174 Length=181799 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| |||| || ||||| || Sbjct 45306 ATGCAGATCTTTGTCAAGACGCTTACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCC 45247 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| ||||| || || || || || ||||| Sbjct 45246 GACACCATCGACAACGTGAAGGCGAAGATTCAG-GACAAGGAGGGCATCCCTCCCGACCA 45188 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| |||| |||||||||||||| | || |||| |||||| | |||||||| Sbjct 45187 ACAGCGTCTTATCTTTGCCGGCAAACAGCTCGAGGATGGTCGCACGCTCTCGGATTACAA 45128 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || || ||||| ||||| || ||| | || || | || | ||||||| Sbjct 45127 CATCCAGAAAGAGTCCACTCTGCATCTCGTCCTGCGTCTCCGTGGAGGAA 45078 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||| || || |||| || |||| || || || || Sbjct 45534 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACCATTACCCTCGAGGTTGAATCCTCC 45475 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| | ||||| | ||| || || || || || || ||||| Sbjct 45474 GACACCATCGACAACGTCA---AGGCAAAGATTCAG-GATAAGGAGGGCATCCCTCCTGA 45419 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||||| | || ||||| ||||| || | || |||| ||||| | ||| || Sbjct 45418 CCAACAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACGCTTTCCGACTA 45359 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 |||||| || || || ||||| || || Sbjct 45358 CAATATCCAGAAGGAGTCCACTCTCCA 45332 >seq114 Length=262464 Score = 107 bits (118), Expect = 2e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| || ||||||| |||| || ||||||||| Sbjct 228705 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCGTCT 228646 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || || || |||| Sbjct 228645 GACACCATCGA--CAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACC 228588 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || || |||||||| || | || || | ||||| || |||| |||| Sbjct 228587 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGGCGCACGCTGAGCGACTACA 228528 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | ||||| || || |||||| || Sbjct 228527 ACATTCAGAAGGAGAGCACGCTCCA 228503 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || ||||||| | || || |||||||| Sbjct 228933 ATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACGCTTGAGGTCGAGTCGTCG 228874 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || || || || || || || |||||| Sbjct 228873 GACACTATCGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAA 228814 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || || | ||||| | || ||||| Sbjct 228813 CAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCTCGGACTACAAC 228754 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || ||| | || || Sbjct 228753 ATCCAGAAGGAGTCTACTCTCCATCTCGTCCT 228722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433317891811910