Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq173 140 4e-28 seq6 131 2e-25 seq362 84.2 2e-11 >seq173 Length=183199 Score = 140 bits (154), Expect = 4e-28 Identities = 292/432 (68%), Gaps = 6/432 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | || ||||| || || | ||| ||| ||| || | Sbjct 161390 GCATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAG 161331 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || ||||||||||| || || || ||||| || || || || Sbjct 161330 GCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAA 161271 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGC 93269 || || || ||||| ||||| || || | ||||| || || | ||| || | | Sbjct 161270 GATGCCCTCGACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGGT---GGACTTGTCATC 161214 Query 93270 TGA--TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 ||| |||| || | ||||| ||||| || ||||| || ||||| | || |||| || Sbjct 161213 TGAGATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGC 161154 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || ||||| || |||| | | || ||||| || ||||| | || || || Sbjct 161153 GTCGAAGAGGTACTCGCGCTGCACGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTA 161094 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || || |||| |||||||| || ||||| |||||||| || | || || | Sbjct 161093 GGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGC 161034 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | || || || | || || | ||| ||||| || || ||||| ||||||||||| || Sbjct 161033 GGCTTGGACCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACGC 160974 Query 93508 TGCaaaaaaaGC 93519 || || || || Sbjct 160973 AGCGAAGAAGGC 160962 >seq6 Length=777208 Score = 131 bits (144), Expect = 2e-25 Identities = 373/566 (66%), Gaps = 18/566 (3%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 || || ||||| || ||||| | || || |||| || | || ||| || || Sbjct 82578 AAACATGCAAAATCTGTATGCATGCCCTCATCTCTACTGATGAGTTCGTTGGAAAACGTC 82519 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 ||||| || | || ||| || ||||| ||||| |||| | || ||| || || || Sbjct 82518 AAACCGGGCATCAATCCCCGCTTCTTCAGCCAGTATATGGCGGCGAAAGAGCCTGAGAAG 82459 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG--CGGAATTAC 93266 || ||||| ||||| | || || || | | |||| |||| ||| ||| | Sbjct 82458 AAAATACCCTCCACCACCGCGAAAGCTATCAGACGTGT-------TTTGAACGGGATTTC 82406 Query 93267 TG--CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGAT 93324 |||||||| || ||||| | ||||| | |||| | || | ||| Sbjct 82405 GCGACTGATCCAACGTAGCGCCCACGCTGCTTTGTCTCGAATAGACGGAAAACACTCGGC 82346 Query 93325 AGCGTTAAATAGGT-AATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAG 93383 ||| | | ||||| || || ||| ||| ||| ||| || ||||| | || | Sbjct 82345 GGCGCTCAGTAGGTGAAGCTT-CTCATCCCTATCGACGATGATCGTGTCGATGAGGAGCG 82287 Query 93384 AATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTT 93443 | ||||| |||||||| | |||||||| ||||| || || || ||||| || | ||| | Sbjct 82286 AGTACATCTCAGAATGTATGTTCTCCATCGCAATCTGAAACCCATAGAAGCACCGAGCCT 82227 Query 93444 CCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGG 93503 ||| ||||||||||| | || |||| ||||| || ||| ||| || ||||| | Sbjct 82226 CCGGTATCTGCACTTCAGACGCGAACATCTCGACGAGGTTCTCAACGACGATGCCATCAG 82167 Query 93504 ATGCTGCaaaaaaaGCCAATAT--ATGCTTTATAAAATGTTTC--TCATCATCTTTAAGC 93559 |||| ||||||||| | | ||| || | | | ||| |||| || | || || | Sbjct 82166 ATGCGGCAAAAAAACCGAGTATCCGTGATATGAAGAATCTTTCGTTCGCCGTCATTTTGG 82107 Query 93560 TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619 | | ||| ||| | ||| || || | |||||||| || |||||||||||||||| Sbjct 82106 TCGT-CCAGTCGTGTCTATCCTTGGACAAGTCGACTTCCTCCGCAGTCCAAAACGATGCC 82048 Query 93620 TCTGCTTTTTTGTACATATCCCATAT 93645 | ||| |||||||| |||||||| Sbjct 82047 TGTGCACGCTTGTACATCTCCCATAT 82022 >seq362 Length=48712 Score = 84.2 bits (92), Expect = 2e-11 Identities = 282/433 (65%), Gaps = 11/433 (3%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | || ||||| || || | ||| || ||| || | Sbjct 45939 GCATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGGTGGAGAAGGTGAG 45998 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || |||||||||||||| || || || || || || || ||||| Sbjct 45999 GCCGGGCATGAGACCGCGTTTCTTGAGCCAGAAGATCGATGCGAAGGAGCCCGAGAAAAA 46058 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT-ACTGC 93269 || || | |||| |||| || || | || || || || | ||| || | | Sbjct 46059 GATGCCCTTGACGGTGACAAAGGCGACGAGGCGCTCAGCGAA---GGTGGACTTGTCATC 46115 Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| || | ||||| ||||| || ||||| || || || | || |||| || Sbjct 46116 TGAGATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGACGGC 46175 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGT-ATGTATGTATCGATTAACAGAGAAT 93386 || || ||||| || |||| || || ||| ||||| ||||| || || || | Sbjct 46176 GTCGAAGAGGTACTCGCGCT-GTGCGGGGTCCGTGATGTAGGTATCAAT---GAGGGAGT 46231 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 | | || || || | | ||||| | ||||| |||||||| || | || || | Sbjct 46232 AGGTCTCGGAGTGAATGGTGTCCATCATGGTCTGGAAGCCGTAGAAGCAGCGGGCCTCGG 46291 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 | || || || | || || | ||| ||||| || || ||||| || | ||| || | Sbjct 46292 CGGCTTGGACCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATGCTATCCGACG 46351 Query 93507 CTGCaaaaaaaGC 93519 | || || || || Sbjct 46352 CAGCGAAGAAGGC 46364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556847477105360