Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq173 159 7e-34 seq362 118 2e-21 seq6 84.2 4e-11 >seq173 Length=183199 Score = 159 bits (176), Expect = 7e-34 Identities = 532/820 (65%), Gaps = 11/820 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| | |||||||||||||||||||| ||| Sbjct 161656 TCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCATGTCCATGAAGTCGAAGGGGTTCGTG 161597 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| |||| | || || | |||| | |||||| || || ||||| | Sbjct 161596 ACGTTGTACACCTTGTCGTTTCCGAGGGACACGAGCAGGCGGTCCGCGACGAACTCGATG 161537 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| || || ||||||||||| || | || || | || || || | Sbjct 161536 TACTGGCACATGAGGTCCGAGTTCATGCCGATGAGCTTGCACGGGAGCGCTTCCGTGAGG 161477 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || |||| ||| |||| || || ||| | | ||| | ||| | | | || Sbjct 161476 AACTCCTGCTCGATGGCGACGGCGTCCGTGATGA-TGCGGCGGACGGTGTCGGGGTGCGC 161418 Query 251803 -TTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 | || || | | | || || |||| | ||||| ||||||||||| Sbjct 161417 GCGGCGCTTGAGGTGGCTGAAGAGCAGGCATGCAAAGTCGGTGTGCATCCCCTCGTCGCG 161358 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 ||||||| ||||||||| | ||||| ||||| | || || ||| |||||||||| Sbjct 161357 GCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAA 161298 Query 251922 GATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 ||| | ||| |||||| || ||||| | | |||||||| | | || || |||| Sbjct 161297 GATGGACGC-AAAGGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCGACGAGGC 161239 Query 251981 GCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTTTC 252037 | ||||| || |||||||| | || | ||||| ||||| | |||||||| Sbjct 161238 GTTCAGCGAAGGTGGACTTGTCATCTGAGATCCACTTCATGGCCCAGTCGGCCTTCTTCT 161179 Query 252038 CAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGA 252097 | ||||| || |||| || || ||||| | | |||| | ||||| || Sbjct 161178 TGATGCAAGGGATGGTCTCGACGGCGTCGAAGAGGTACTCGCGCTGCACGGGGTCCTTGA 161119 Query 252098 TGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGT 252157 || | || | ||||| ||||| |||| || |||||| || | | |||||| Sbjct 161118 TGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGA 161059 Query 252158 AAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAATGT 252217 | | ||||| || || | | | ||| || | || || | | | || Sbjct 161058 AGCCGTAGAAGCAGCGGGCCTCGGCGGCTTGGACCTCGTTCGAGAACCGCTCAACGAGGT 160999 Query 252218 TCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGTGAC 252277 |||| | || || |||||| | || |||||| | || | | ||||||||||| Sbjct 160998 TCTCGTTGACGATACCATCGGACGCAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGAC 160939 Query 252278 GCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTTCT- 252336 | || | ||||||||||||| |||||| | ||||||| | | ||| | ||| Sbjct 160938 GTTCGTTGTCGTTGAGCTTGGTGTTCCAGTCAACCATGTCCT--TGGACAGGTCCATCTC 160881 Query 252337 -TCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATT 252375 ||| | |||||||| | | | | ||||||||||||||| Sbjct 160880 CTCCGCTGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATT 160841 >seq362 Length=48712 Score = 118 bits (130), Expect = 2e-21 Identities = 525/820 (64%), Gaps = 21/820 (3%) Strand=Plus/Plus Query 251567 AGAAA-TTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCA 251625 ||||| || | |||||||| ||| || || | |||| |||||| ||||| |||||| || Sbjct 45676 AGAAAGTTCGTCTTGCCCTGCAGGGAAATCATATCCACGAAGTCAAAGGGATTTGTGACA 45735 Query 251626 TTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATAC 251685 |||||| |||| | || || | |||| | |||||| || | |||| | ||| Sbjct 45736 TTGTACACCTTGTCGTTCCCGAGGGACACGAGCAGGCGGTCCGCGAAGAACTTGATGTAC 45795 Query 251686 TGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAAT 251745 || | ||| || || ||||||||||| || | ||| || | | || || ||| Sbjct 45796 TGGCACATGAGGTCCGAGTTCATGCCGATGAGCTTACACGGGAGCACTTCCGTGAGGAAC 45855 Query 251746 TCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGCTTG 251805 |||| || |||| || || ||| | || || | ||| | | || | Sbjct 45856 TCCTGCTCAATGGCGACGGCGTCCGTGATGAT-GCGGCGGACGGTGTCGGGATGCGCGCG 45914 Query 251806 TT-CTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGACT 251864 | ||| || | | | || || |||| | ||||| ||||||||||| || Sbjct 45915 GTGCTCGAGGTGGCTGAAGAGCAGGCATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCT 45974 Query 251865 GATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAGAT 251924 ||||| |||| |||| | ||||| ||||| | || || ||| ||||||||||||| Sbjct 45975 GATGAGCTCGGTGGAGAAGGTGAGGCCGGGCATGAGACCGCGTTTCTTGAGCCAGAAGAT 46034 Query 251925 ---TGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCG 251981 |||| ||||| || ||||| | | |||| ||| || | || || ||||| Sbjct 46035 CGATGCG---AAGGAGCCCGAGAAAAAGATGCCCTTGACGGTGACAAAGGCGACGAGGCG 46091 Query 251982 CTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTT-TC 252037 |||||| || |||||||| | || | ||||| ||||| | |||||||| | Sbjct 46092 CTCAGCGAAGGTGGACTTGTCATCTGAGATCCACTTCATGGCCCAGTCGGCCTTCTTCTT 46151 Query 252038 CAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGA 252097 | | | ||||| || |||| || || ||||| | | |||| || |||| || Sbjct 46152 GATGCAC-GGGATGGTCTCGACGGCGTCGAAGAGGTACTCGCGCTGTGCGGGGTCCGTGA 46210 Query 252098 TGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGT 252157 || | |||| | ||| ||||| |||| || || |||| || | | ||||| Sbjct 46211 TGTAGGTATCA---ATGAGGGAGTAGGTCTCGGAGTGAATGGTGTCCATCATGGTCTGGA 46267 Query 252158 AAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAATGT 252217 | | ||||| || || | | | ||| || | || || | | | || Sbjct 46268 AGCCGTAGAAGCAGCGGGCCTCGGCGGCTTGGACCTCGTTCGAGAACCGCTCAACGAGGT 46327 Query 252218 TCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGTGAC 252277 |||| | || |||| ||| | || |||||| | || | | ||||||||||| Sbjct 46328 TCTCGTTGACGATGCTATCCGACGCAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGAC 46387 Query 252278 GCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTTCT- 252336 | || | ||||||||||| | ||||||| | ||||||| | | ||| | ||| Sbjct 46388 GTTCGTTGTCGTTGAGCTGGGTGTTCCAGTCGACCATGTCCT--TGGACAGGTCCATCTT 46445 Query 252337 -TCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATT 252375 ||| | |||||||| | | | | ||||||||||||||| Sbjct 46446 CTCCGCTGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATT 46485 >seq6 Length=777208 Score = 84.2 bits (92), Expect = 4e-11 Identities = 153/222 (69%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || || ||||| || |||| | ||||| || || || |||| |||||| |||| ||| Sbjct 408527 GGCGAAGATCTTTGCAACTGCCAATTCTCCCTGGCTTACGGTGCCAAGATTTTGCTCAAC 408586 Query 279405 TC---TACCCGCC-TCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGG 279460 | ||||| || || |||| |||||| |||| || |||||| |||| || || Sbjct 408587 ACGGCTACCCTCCGTC----TCAAACGTGGCCACCGATACGGTCTCTGCGGTAAGAACGG 408642 Query 279461 AGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAA 279520 | || ||| || || ||||||||||| | |||||||| | ||||| || || Sbjct 408643 TACCGGAAAGTCGACGCTGATGCGCGCCATCACCAACGGTCAAGTTGAAGGCTTCCCCTC 408702 Query 279521 CGCATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGA 279562 | | ||||| | || | || || |||||||||||||| Sbjct 408703 CCCTGACGAGGTCCGCACGTTCTACGTCGAGCACGACATCGA 408744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027811594229674