Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq174 143 6e-29 seq114 134 3e-26 seq161 89.7 1e-12 seq49 89.7 1e-12 seq173 84.2 5e-11 seq85 84.2 5e-11 seq12 84.2 5e-11 >seq174 Length=181799 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | ||| || || |||||||| ||||||| Sbjct 45308 CCACCACGCAGACGAAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGAA 45367 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||||||||| || || | || || || || ||||| ||||||||||| | ||| Sbjct 45368 AGCGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGG 45427 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || |||||||| || || || || ||||| || || | ||| ||||| || Sbjct 45428 ATGCCCTCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACC 45487 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| || ||||| ||||||||||| || ||||| Sbjct 45488 TCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 45534 Score = 136 bits (150), Expect = 9e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | || |||||||| | ||| ||||| ||||| || || || | Sbjct 45079 TCCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGA 45138 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||||||||| || || || | ||||| || || ||||| ||||||||||| || Sbjct 45139 GAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGG 45198 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || ||||| || ||||| |||||||| || || | ||| || || || Sbjct 45199 GATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGAC 45258 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || |||||||| || |||||||| Sbjct 45259 CTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || || || | || || || |||||| Sbjct 45625 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 45684 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||||||| || || || || || |||||||| ||||| || ||||| Sbjct 45685 ATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 45744 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||||||||| || || || ||||||||| Sbjct 45745 TCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACG 45804 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 45805 AAGATCTGCATT 45816 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||| |||||||| || || || | ||| || || || || || | || Sbjct 44876 TGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGAGCTGC 44935 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || ||||||||||| |||||||| || ||||| || || ||||||||||| ||| Sbjct 44936 TTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTTC 44995 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || ||||| || || | || ||| || || || || ||||| ||||| || || Sbjct 44996 GCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTCCCGTT 45055 Query 288451 AGAGTCTTGACGAATATCTGCATT 288474 || ||||| ||||| ||||||||| Sbjct 45056 AGGGTCTTAACGAAAATCTGCATT 45079 >seq114 Length=262464 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || |||||||| | || || || ||||| || ||||| | | Sbjct 228707 CCTCCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAG 228766 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || |||||||| ||| Sbjct 228767 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 228826 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| || || || ||||| || |||| || ||| || || Sbjct 228827 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCGATAGTGTCCGACGACTCGACC 228886 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| ||||| || |||||||| || |||||||| Sbjct 228887 TCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 228933 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 || || | |||||| || || || || || |||||| |||||||| ||||| || | Sbjct 228500 AGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGC 228559 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || |||||||| || ||||| || ||||| || || || |||||||| Sbjct 228560 TGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATC 228619 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 ||||| || || || || || | || ||| || || ||||||||||| ||||| ||| Sbjct 228620 TTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCG 228679 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| || ||||| Sbjct 228680 GTGAGGGTCTTGACGAAGATTTGCAT 228705 >seq161 Length=195812 Score = 89.7 bits (98), Expect = 1e-12 Identities = 200/298 (67%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475 ||||||||| |||| ||| | || || ||||| |||| |||||||| || | || Sbjct 123082 CCAAGCGTCCACGTCTGAGCTCTACGGCAAAGTCGTCGAAACTCCTCAGAGCGAGACGAC 123023 Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 ||| || || ||||| ||| ||||| || ||| | ||||| || |||||| | Sbjct 123022 TCCCTTCTACCCTCGCTCCCCCTACGGCTGCGCCAAGCTCTACGCGTACTGGATCACTGT 122963 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595 || ||| | ||| | || ||||| | ||||| || |||||||||||||| Sbjct 122962 TAACTACAGGGAGGCATACGGAATGTACGCCTGCAATGGTATCCTGTTCAATCACGAGAG 122903 Query 72596 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 72655 ||||| ||||| |||||||| | || ||||||| | || ||| | | | | Sbjct 122902 TCCCAGGCGAGGCAGGACATTCGTGACCAGGAAGATCACGAGAGCGGCCGCAGAGA-TCT 122844 Query 72656 CAATGGTGTCG-AAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGG 72712 || ||| | | | ||| |||||||||| || || ||||| | | |||||||| Sbjct 122843 CACTGGGCAAGCAGCAGTGCTTGTATCTCGGAAACATCGATGCTCAGCGTGATTGGGG 122786 Score = 89.7 bits (98), Expect = 1e-12 Identities = 200/298 (67%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475 ||||||||| |||| ||| | || || ||||| |||| |||||||| || | || Sbjct 139935 CCAAGCGTCCACGTCTGAGCTCTACGGCAAAGTCGTCGAAACTCCTCAGAGCGAGACGAC 139876 Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 ||| || || ||||| ||| ||||| || ||| | ||||| || |||||| | Sbjct 139875 TCCCTTCTACCCTCGCTCCCCCTACGGCTGCGCCAAGCTCTACGCGTACTGGATCACTGT 139816 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595 || ||| | ||| | || ||||| | ||||| || |||||||||||||| Sbjct 139815 TAACTACAGGGAGGCATACGGAATGTACGCCTGCAATGGTATCCTGTTCAATCACGAGAG 139756 Query 72596 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 72655 ||||| ||||| |||||||| | || ||||||| | || ||| | | | | Sbjct 139755 TCCCAGGCGAGGCAGGACATTCGTGACCAGGAAGATCACGAGAGCGGCCGCAGAGA-TCT 139697 Query 72656 CAATGGTGTCG-AAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGG 72712 || ||| | | | ||| |||||||||| || || ||||| | | |||||||| Sbjct 139696 CACTGGGCAAGCAGCAGTGCTTGTATCTCGGAAACATCGATGCTCAGCGTGATTGGGG 139639 >seq49 Length=440159 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || || ||||||||||| || || || || || || | || ||||| || ||| Sbjct 336031 CCCTCCTTGTCCTGGATTTTGGCCTTTACATTGTCGATGGTGTCTGAGGATTCGACCTCG 336090 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||| ||||||||||||||||| |||||||| Sbjct 336091 AGGGTGATGGTCTTCCCCGTCAGAGTCTTGACGAAGATCTGCAT 336134 >seq173 Length=183199 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| | || |||||| || || ||||| ||||| || || || | || Sbjct 161505 ATCGGCATGAACTCGGACCTCATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTC 161564 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 | | ||||| | || || |||||||| | ||| ||||||| ||| ||||| | Sbjct 161565 GTGTCCCTCGGAAACGACAAGGTGTACAACGTCACGAACCCCTTCGACTTCATGGACATG 161624 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGT 269312 || || || | || ||||||||||||||||| ||||| || Sbjct 161625 ATCTCCCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGT 161665 >seq85 Length=318930 Score = 84.2 bits (92), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 ||||||| ||||| || || || || || | | ||| || || ||||||||||||| Sbjct 169810 CCTGGATCTTCGCCTTGACATTGTCGATGGTGTTCGACGACTCGACCTCGAGCGTGATCG 169751 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||| ||||| || |||||||||||||||||||| Sbjct 169750 TCTTGCCGGTGAGCGTCTTGACGAATATCTGCAT 169717 >seq12 Length=673443 Score = 84.2 bits (92), Expect = 5e-11 Identities = 160/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| || |||||||| | ||| || || ||||| || ||| Sbjct 358908 CATG-CCGCCACGGAGATGCAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGC 358850 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | |||||||| | || || | || ||||| || ||||| || |||| ||| | Sbjct 358849 CCGAGAGCGTGCACTCATCCTCGAGCTGCTTTCCGGCAAAGATGAGGCGCTATTGGGCGG 358790 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 | ||| | | ||| ||||||| ||||| || | || || || | || || | Sbjct 358789 ACGAGATCTCCGCCTTACCCTGGATCTTCGCCTTGAA-TTGTCGATGGTGTCCGAAGACT 358731 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | | |||||| |||||||||| ||||| | ||||||||||| |||||||| Sbjct 358730 CGATCTCGAGCATGATCGTCTTGCCGGTGAT-GTCTTGACGAAGATCTGCAT 358680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179625471187692