Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq114 102 8e-17 seq174 91.5 1e-13 seq41 91.5 1e-13 >seq114 Length=262464 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| || | |||||| |||| || |||||||||||||| | Sbjct 228515 TCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAAG 228574 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| |||||||||||||| || || || || || || || || || ||| ||| Sbjct 228575 ATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTG 228634 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || ||| | || || || | || | |||||||||||| | || || ||| Sbjct 228635 TCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACG 228694 Query 64433 AAAATTTGCAT 64443 || |||||||| Sbjct 228695 AAGATTTGCAT 228705 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || |||||||| || | || |||||| |||| Sbjct 228722 AGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 228781 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | ||||| ||||| |||||||| || || || || || || Sbjct 228782 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCC 228841 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409 || || || ||| || || | || | ||| || || || || | || | || Sbjct 228842 TGGATCTTGGCCTTGACGTTGTCGATAGTGT--CCGACGACTCGACCTCAAGCGTGATGG 228899 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| | || || || || || ||||| Sbjct 228900 TCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 228933 >seq174 Length=181799 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| ||||||||||| | || ||| || | || || |||||| Sbjct 44876 TGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGAGCTGC 44935 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | || || ||||||||||||||||| || || || || || || || || Sbjct 44936 TTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTTC 44995 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGG 64418 ||| || || | || | ||| || || || || | || | |||||| || | Sbjct 44996 GCCTTGACGTTGTCAATCGTGT--CCGACGACTCGACCTCAAGGGTGATGGTCTTTCCCG 45053 Query 64419 TCAAAGTTTTTACGAAAATTTGCATT 64444 | | || || |||||||| |||||| Sbjct 45054 TTAGGGTCTTAACGAAAATCTGCATT 45079 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || || | || || || || || || ||||| || | Sbjct 45307 ACCACCACGCAGACGAAGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGA 45366 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || ||||||||||| ||| | ||||| ||||| ||||| ||||| Sbjct 45367 AAGCGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGG 45426 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || ||| ||| || || | || || || || || Sbjct 45427 GATGCCCTCCTTATCCTGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAAC 45486 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || ||||| |||||||| Sbjct 45487 CTCGAGGGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 45534 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || ||||| || ||||||||||| | || ||||| | || Sbjct 45095 AGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCC 45154 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||| ||||||||| | || || ||||| ||||||||||| || || || || || Sbjct 45155 TCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCC 45214 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || || || | ||| | |||| Sbjct 45215 TGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTC 45274 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || || || || ||||| Sbjct 45275 TTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||| | |||||| || || || |||||||| || | | ||||| | || |||||| Sbjct 45610 AGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGC 45669 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||||||||| | ||||| ||||| || ||||||||||| || || || || || || Sbjct 45670 TGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATC 45729 Query 64358 TT 64359 || Sbjct 45730 TT 45731 >seq41 Length=470795 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || || | || || || || || |||||||| || | Sbjct 242653 ACCACCACGCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 242712 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| |||||||||||||| | || || ||||||||||||||||| Sbjct 242713 GAGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 242772 Query 64336 AAT 64338 ||| Sbjct 242773 AAT 242775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499632845998160