Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq173 172 5e-38 seq362 154 1e-32 seq114 111 2e-19 seq174 105 7e-18 >seq173 Length=183199 Score = 172 bits (190), Expect = 5e-38 Identities = 340/491 (69%), Gaps = 9/491 (2%) Strand=Plus/Plus Query 52341 AAAAAGGCTCAGTGGGCAATGAAGTGGATCG-AGAGCGACACCGCCACGCTGGCCGAGCG 52399 || ||||| | ||||| |||||||||||| ||| |||| |||| | || || || Sbjct 161181 AAGAAGGCCGACTGGGCCATGAAGTGGATCTCAGAT-GACAAGTCCACCTTCGCTGAACG 161239 Query 52400 CATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTT 52459 | | || ||||| ||| ||||||||| | || || || ||| |||||| ||||||| Sbjct 161240 CCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCGTCCATCTT 161299 Query 52460 TTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCG 52519 | | || | | || | ||||||||||| || ||| ||||||| | || || Sbjct 161300 CTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCG 161359 Query 52520 CGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAA 52579 |||||| || ||||||| |||||||| ||||| || || | | | | | || Sbjct 161360 CGACGAGGGGATGCACACCGACTTTGCATGCCTGCTCTTCA-GCCAC-CTCAAGCGCCGC 161417 Query 52580 ATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTT 52639 | | | ||||| ||| |||| ||| ||| || || || ||||| ||||||| Sbjct 161418 GC-GCACCCCGACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATCGAGCAGGAGTT 161476 Query 52640 TTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTA 52699 | |||| ||||| ||| | |||| | ||||||||| || | ||||||| |||| Sbjct 161477 CCTCACGGAAGCGCTCCCGTGCAAGCTCATCGGCATGAACTCGGACCTCATGTGCCAGTA 161536 Query 52700 CATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCCAAAGTACTTCAACG 52758 ||||||||| || ||||| || ||| | ||| ||||| | | ||| || | ||||| Sbjct 161537 CATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCCCTCGGAAACGACAAGGT-GTACAACG 161595 Query 52759 -CTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTC 52817 | || || || || || || ||| ||| || || || |||||||||| ||||| ||| Sbjct 161596 TCACG-AACCCCTTCGACTTCATGGACATGATCTCCCTGCAGGGCAAGACGAACTTCTTC 161654 Query 52818 GAGAAGCGAGT 52828 |||||||| || Sbjct 161655 GAGAAGCGCGT 161665 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTT 52709 |||||||| |||| || | |||||||| || | | ||| | ||||||||||||| Sbjct 158984 GCGCTGCCTGTCGGTCTCATTGGCATGAATGCAAAATTAATGCGACAGTACATCGAGTTC 158925 Query 52710 GTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCCAAAGTACTTCAACGCTCGCAATCC 52768 || || || | || | || |||||| | | |||| | || | || | |||||| Sbjct 158924 GTAGCTGACAGACTCCTAGTCTCGCTCGGCAACGACAAACT-CTACCACTCCACCAATCC 158866 Query 52769 GTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 |||||| || ||| ||| || ||||| |||| ||||||||||| || ||||| || || Sbjct 158865 GTTTGATTTCATGGACATGATCTCGCTCCAGGGAAAGACCAACTTCTTTGAGAAACGCGT 158806 Query 52829 CGGCGAGTA 52837 | ||| || Sbjct 158805 CTCCGACTA 158797 >seq362 Length=48712 Score = 154 bits (170), Expect = 1e-32 Identities = 355/522 (68%), Gaps = 17/522 (3%) Strand=Plus/Minus Query 52318 TCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCG-AGAGC 52376 ||||| | | |||||| | || ||||| | ||||| |||||||||||| ||| Sbjct 46171 TCGAGACCATCCCGTGCATCAAGAAGAAGGCCGACTGGGCCATGAAGTGGATCTCAGAT- 46113 Query 52377 GACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttt 52436 |||| |||| | || |||||| | || ||||| | || ||| ||||| | ||||| Sbjct 46112 GACAAGTCCACCTTCGCTGAGCGCCTCGTCGCCTTTGTCACCGTCAAGGGCATCTTTTTC 46053 Query 52437 tCCGGCAGCTTTGCCGCCATCTTTTACATTAA--AACGAAAGGCATAATGCCCGGCCTGA 52494 || ||| ||| || | ||||| | | || |||| || | ||||||||||| | Sbjct 46052 TCGGGCTCCTTCGCATCGATCTTCTGGCTCAAGAAACGC--GGTCTCATGCCCGGCCTCA 45995 Query 52495 CGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCT 52554 | ||| || |||| | || |||||||| || ||||||| |||||||| ||||| Sbjct 45994 CCTTCTCCACCGAGCTCATCAGCCGCGACGAGGGGATGCACACCGACTTTGCATGCCTGC 45935 Query 52555 ACTACAAGACGCGCGTG-ACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG 52613 || || | || | |||| | || | ||||| ||| |||| ||| | Sbjct 45934 TCTTCAGCCACCTCGAGCACCG----CGCGCATCCCGACACCGTCCGCCGCATCATCACG 45879 Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 || || || || || || ||||||| | |||| | ||| ||| |||| | ||| Sbjct 45878 GACGCCGTCGCCATTGAGCAGGAGTTCCTCACGGAAGTGCTCCCGTGTAAGCTCATCGGC 45819 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||| || | ||||||| |||||||| |||| | ||||| || ||| | ||| Sbjct 45818 ATGAACTCGGACCTCATGTGCCAGTACATCAAGTTCTTCGCGGACCGCCTGCTCGTGTCC 45759 Query 52734 CTCGGGCA-GCCAAAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTT 52791 |||||| | | ||| || | ||| | || | ||||| ||||| || || | | |||| Sbjct 45758 CTCGGGAACGACAAGGT-GTACAATG-TCACAAATCCCTTTGACTTCGTGGATATGATTT 45701 Query 52792 CGCTTGAGGGCAAGACCAACTTTTTCGAGAA--GCGAGTCGG 52831 | || |||||||||| |||||| ||||||| ||| ||||| Sbjct 45700 CCCTGCAGGGCAAGACGAACTTTCTCGAGAAAGGCGTGTCGG 45659 >seq114 Length=262464 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||||| || ||| ||||||||| || || |||| | Sbjct 228514 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAA 228573 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| || ||||| ||||| || || || || || ||||| ||| || || | ||| Sbjct 228574 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATT 228633 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | |||||| | |||||| ||||||| ||| | || || || || || || || | Sbjct 228634 G-TCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGA 228692 Query 138602 CAAAAATCTGCAT 138614 | || || ||||| Sbjct 228693 CGAAGATTTGCAT 228705 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||| || || || |||| Sbjct 228740 GACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCG 228799 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||||||||| || || || || || || || ||| || || | Sbjct 228800 AAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACG 228859 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||| | ||| | || || || || || || || Sbjct 228860 TTGTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTTG 228919 Query 138601 ACAAAAATCTGCATGGCT 138618 ||||| ||||||||| || Sbjct 228920 ACAAAGATCTGCATGCCT 228937 >seq174 Length=181799 Score = 105 bits (116), Expect = 7e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || | ||| | | ||||| || || |||||||| || Sbjct 45080 CCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAG 45139 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| ||||| |||| | |||| |||||||||||||| ||||| Sbjct 45140 AGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGG 45199 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | || | ||| || | |||||||| ||||| | Sbjct 45200 ATGCCCTCCTTGTC-CTGAATCTTCGCCTTCACGTTG-TCGATGGTGTCGGATGACTCGA 45257 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| || || || ||||| |||||||| Sbjct 45258 CCTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || || ||||||||| | || || |||||||| || || || | | Sbjct 45341 GACTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGTCCATCCTCGAGCTGCTTGCCAGCA 45400 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||||||||| ||||| || || || || || ||| | |||| || | Sbjct 45401 AAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATC-CTGAATCTTTGCCTTGAC 45459 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||||| || || ||||||| || | || || || ||||| || | Sbjct 45460 GTTG-TCGATGGTGTCGGAGGATTCAACCTCGAGGGTAATGGTCTTGCCCGTCAGGGTCT 45518 Query 138599 TTACAAAAATCTGCAT 138614 | || || || ||||| Sbjct 45519 TGACGAAGATTTGCAT 45534 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||| || ||||| || || || |||| Sbjct 45622 GACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCG 45681 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || |||||||| || ||||| || || || ||||| ||| || || | Sbjct 45682 AAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACG 45741 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||||| || | ||| || || || || || || Sbjct 45742 TTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTG 45801 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 45802 ACGAAGATCTGCAT 45815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496250526922080