Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq173 176 4e-39 seq174 136 4e-27 seq362 125 7e-24 seq114 116 4e-21 >seq173 Length=183199 Score = 176 bits (194), Expect = 4e-39 Identities = 403/602 (67%), Gaps = 25/602 (4%) Strand=Plus/Plus Query 46979 CATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACGAAGAGAAGCA 47038 ||||||| | || | ||| ||| ||||| || || |||||| ||| | | ||| Sbjct 161078 CATCCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAGGACCCCGTGCAGCG 161137 Query 47039 AGCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGC 47098 | | || || ||| |||||| ||| || ||| | | |||||||| ||||| Sbjct 161138 CGAGTACCTCTTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGC 161197 Query 47099 CATGAAGTACATTGAAAACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCAT 47158 |||||||| || | | || || ||| | || ||||| | |||| || ||| Sbjct 161198 CATGAAGTGGATCTCAGATGACAAGTCCACCTTCGCTGAACGCCTCGTCGCCTTTGCCGC 161257 Query 47159 CGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGG 47218 |||||||||| |||||||||||||| ||||||| | || || | | || | || Sbjct 161258 CGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCGTCCATCTTCTGGCTCAAGAAGCGCGG 161317 Query 47219 AGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACAC 47278 | |||||||||||||| || ||||||||| ||| | ||||| || ||||||| Sbjct 161318 TCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCGACGAGGGGATGCACAC 161377 Query 47279 CAACTTTGCCTGTCTCTACTACA-ACACTAGAGTCGATCAAAAGTTGGACGTGCC----C 47333 | ||||||| || || || || ||| |||| | | || || | Sbjct 161378 CGACTTTGCATGCCTGCTCTTCAGCCAC--------CTCAAGCGCCGCGCGCACCCCGAC 161429 Query 47334 ACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCT 47393 |||||| || ||| | | || ||||||||||| ||| |||||| || | || || Sbjct 161430 ACCGTCCGCCGCATCATCACGGACGCCGTCGCCATCGAGCAGGAGTTCCTCACGGAAGCG 161489 Query 47394 CTGCCCG---AATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTT 47450 || |||| || | | | || |||||| |||| | ||| | |||||||||| || Sbjct 161490 CT-CCCGTGCAAGC--TCATCGGCATGAACTCGGACCTCATGTGCCAGTACATCGAGTTC 161546 Query 47451 GTCGCCGACCGCCTGCTCGTTCAGCT---AAAGTATCCCAAGATTTACCACACCGAGAAT 47507 ||||| |||||||||||||| || ||| | |||| | ||| || | ||| Sbjct 161547 GTCGCGGACCGCCTGCTCGTGTCCCTCGGAAACGA---CAAGGTGTACAACGTCACGAAC 161603 Query 47508 CCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGC 47567 || ||||| || ||| ||| || || || |||||||||| ||||| |||||||||||| Sbjct 161604 CCCTTCGACTTCATGGACATGATCTCCCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGC 161663 Query 47568 GT 47569 || Sbjct 161664 GT 161665 >seq174 Length=181799 Score = 136 bits (150), Expect = 4e-27 Identities = 159/211 (75%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | ||| ||||| || || || ||||| ||| | ||||| ||| || Sbjct 45606 ACCAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 45665 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| |||| | ||||| ||||||||||| ||||||||||||||| Sbjct 45666 AAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTG 45725 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| ||| ||||| |||| |||| ||||||| | |||||| |||| ||| | ||| | Sbjct 45726 GATCTTCGCCTTGACGTTG-TCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCT 45784 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || || || || || || |||||||| Sbjct 45785 TGCCCGTGAGGGTCTTGACGAAGATCTGCAT 45815 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || | |||| || | ||| | || |||||||| || || |||||||| Sbjct 45079 TCCTCCACGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGA 45138 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||||| ||| || |||||||| || || |||| | ||||| || |||||||| Sbjct 45139 GAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGG 45198 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||||||||||||| || ||| ||| | |||| |||| |||||| | ||||| Sbjct 45199 GATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTG-TCGATGGTGTCGGATGACTCGA 45257 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| || | || ||||| || || || || ||||| |||||||| Sbjct 45258 CCTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| ||| | |||||| ||| || ||||| || ||| Sbjct 45338 GTGGACTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGTCCATCCTCGAGCTGCTTGCCA 45397 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 || |||| | ||||| || || ||||| ||||||||||| ||| ||| | | || ||| Sbjct 45398 GCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCC-TGAATCTTTGCCTT 45456 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || |||| |||| |||||| | || || |||| ||| | || ||||| ||||| | Sbjct 45457 GACGTTG-TCGATGGTGTCGGAGGATTCAACCTCGAGGGTAATGGTCTTGCCCGTCAGGG 45515 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || || ||||| Sbjct 45516 TCTTGACGAAGATTTGCAT 45534 Score = 100 bits (110), Expect = 3e-16 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 126906 CCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTA 126965 |||| || | || || || ||||| || |||||||| | || || ||| || | Sbjct 44871 CCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGA 44930 Query 126966 GCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA 127025 |||| || || ||| |||| | |||||||| |||||||| || |||||||| ||| || Sbjct 44931 GCTGCTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGA 44990 Query 127026 TTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 | ||| ||||| ||||| | | ||||||| |||||| || | ||| | || || Sbjct 44991 TCTTCGCCTTGACGTTGT-CAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTT 45049 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || ||||||||||| Sbjct 45050 CCCGTTAGGGTCTTAACGAAAATCTGCAT 45078 >seq362 Length=48712 Score = 125 bits (138), Expect = 7e-24 Identities = 348/525 (66%), Gaps = 23/525 (4%) Strand=Plus/Minus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118 |||||| ||| || ||| | | |||||||| ||||||||||||| || | | | Sbjct 46171 TCGAGACCATCCCGTGCATCAAGAAGAAGGCCGACTGGGCCATGAAGTGGATCTCAGATG 46112 Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178 | || ||| | || || || | |||| || | || |||| ||||| |||| |||| Sbjct 46111 ACAAGTCCACCTTCGCTGAGCGCCTCGTCGCCTTTGTCACCGTCAAGGGCATCTTTTTCT 46052 Query 47179 CGGGCAGCTTTGCGGCGATATTTT---ACATGAAAACCAAAGGAGTTATGCCCGGCCTCA 47235 ||||| ||| || |||| || | || |||| | || | ||||||||||||| Sbjct 46051 CGGGCTCCTTCGCATCGATCTTCTGGCTCAAGAAACGC---GGTCTCATGCCCGGCCTCA 45995 Query 47236 CGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCT 47295 | || || |||||| ||| | ||||| || |||||||| ||||||| || || Sbjct 45994 CCTTCTCCACCGAGCTCATCAGCCGCGACGAGGGGATGCACACCGACTTTGCATGCCTGC 45935 Query 47296 ACTACA-ACACTAGAGTCGATCAAAAGTTGGACGTGCC--CACCGTCAGCGACATGTTTG 47352 || || ||| |||| | | | | | || ||||||| || ||| | Sbjct 45934 TCTTCAGCCAC----CTCGAGC--ACCGCGCGCATCCCGACACCGTCCGCCGCATCATCA 45881 Query 47353 CCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCG---AATCTTTAG 47409 | || ||||||||||||||| |||||| || | || | || |||| || | | Sbjct 45880 CGGACGCCGTCGCCATTGAGCAGGAGTTCCTCACGGAAGTGCT-CCCGTGTAAGC--TCA 45824 Query 47410 TGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCG 47469 | || |||||| |||| | ||| | |||||||| | || |||| ||||||||||||| Sbjct 45823 TCGGCATGAACTCGGACCTCATGTGCCAGTACATCAAGTTCTTCGCGGACCGCCTGCTCG 45764 Query 47470 TTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACA 47529 | || | | |||| | ||| | | ||||| || || || || | | | Sbjct 45763 TGTCCCTCGGGAACGACAAGGTGTACAATGTCACAAATCCCTTTGACTTCGTGGATATGA 45704 Query 47530 TTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAA--GCGCGTCGG 47572 |||| || |||||||||| |||||| ||||||| ||| ||||| Sbjct 45703 TTTCCCTGCAGGGCAAGACGAACTTTCTCGAGAAAGGCGTGTCGG 45659 >seq114 Length=262464 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || |||||| || || ||||| || || ||| | Sbjct 228514 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAA 228573 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | |||||||| ||||| || ||||||||||||||| ||| ||| ||||| | Sbjct 228574 GATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATT 228633 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| |||||| | |||||| |||| || | || |||||||| || || || || Sbjct 228634 GTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGAC 228693 Query 127102 AAAAATCTGCAT 127113 || || ||||| Sbjct 228694 GAAGATTTGCAT 228705 Score = 100 bits (110), Expect = 3e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || | ||||| || || ||||| || || Sbjct 228737 GTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCG 228796 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||| || ||||| || ||||||||||| ||| ||| || |||| Sbjct 228797 GCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTG 228856 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||||| |||||| || | || | || |||||||| || || Sbjct 228857 ACGTTG-TCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGT 228915 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 || ||||| ||||||||| || Sbjct 228916 CTTGACAAAGATCTGCATGCCT 228937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475489423643360