Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq173 181 1e-40 seq362 141 1e-28 seq128 91.5 2e-13 seq92 91.5 2e-13 >seq173 Length=183199 Score = 181 bits (200), Expect = 1e-40 Identities = 539/819 (66%), Gaps = 27/819 (3%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||||||| || ||||||||||||||||| ||||| || | ||| ||| | ||||| Sbjct 161675 GTAGTCCGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCATGTCCAT 161616 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || |||||| | ||| | | |||| | || | ||| || Sbjct 161615 GAAGTCGAAGGGGTTCGTGACGTTGTACACCTTGTCGTTTCCG--AGGGACACGAGCAGG 161558 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 || |||| |||| |||| ||||||| |||| || |||||||| |||||||| || Sbjct 161557 CGGTCCGCGACGAACTCGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAGCTTG 161498 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || |||||||| ||| || |||| ||| ||| ||| | || || ||| | |||| | Sbjct 161497 CACGGGAGCGCTTCCGTGAGGAACTCCTGCTCGATGGCGACGGCGTCCGTGATGATGCGG 161438 Query 127469 TGAATAGTGTCCAC---CCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCA--CA-GCA 127522 | | ||||| | | | | ||| | | || |||||| || || ||| Sbjct 161437 CGGACGGTGTCGGGGTGCGCGCGGCGCTTGAGGT--GGCT-GAAGAG---CAGGCATGCA 161384 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| | |||||||| ||| |||||| || || |||||| || || ||| Sbjct 161383 AAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGC 161324 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 |||||||| |||||||| | |||||| || | ||| ||||| ||||||||||| ||| Sbjct 161323 ATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAGATGCCC 161264 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAAC 127699 || || || || || | || || || || |||| |||||| ||| | | Sbjct 161263 TCGACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGG---TGGACTTGTCATCTGAGATC 161207 Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759 |||||||| ||||| | ||||| |||| ||| || |||| ||||| || || || ||| Sbjct 161206 CACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAAG 161147 Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819 || | || | || || |||||||| | || ||||| || || || ||| Sbjct 161146 AGGTACTCGCGCTGCACGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCG 161087 Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878 ||||| | | ||| || | ||| | ||||||| |||| || ||| || Sbjct 161086 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCTTG 161028 Query 127879 TACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 127938 ||||| | | || | | || ||||| || || ||||||||| |||| || Sbjct 161027 GACCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACGCAGCGAA 160968 Query 127939 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTC 127995 || || |||| | ||||| | |||| || ||||| || ||| |||||||| Sbjct 160967 GAAGGCGAGGACGTGGGAGATGAAGTGACGTTCGTTGTCGTTGAGCTTGGTGTTCCAGTC 160908 Query 127996 GTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | | ||||| || || || | ||||||||| ||||| Sbjct 160907 AACCATGTCCTTGGACAGGTCCATCTCCTCCGCTGTCCA 160869 >seq362 Length=48712 Score = 141 bits (156), Expect = 1e-28 Identities = 462/708 (65%), Gaps = 30/708 (4%) Strand=Plus/Plus Query 127342 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 127401 ||| || || |||| || | ||| ||||||| |||| || |||||||| ||||| Sbjct 45765 GAGCAGGCGGTCCGCGAAGAACTTGATGTACTGGCACATGAGGTCCGAGTTCATGCCGAT 45824 Query 127402 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTAC 127461 ||| ||||| |||||| | ||| || |||| ||| ||||||| | || || ||| | Sbjct 45825 GAGCTTACACGGGAGCACTTCCGTGAGGAACTCCTGCTCAATGGCGACGGCGTCCGTGAT 45884 Query 127462 GATGGCGTGAATAGTGTCCA----CCCCAGGTCTATTGCGTAAAGTCT-TGAAGAGTTCC 127516 |||| | | | ||||| | | ||| || | || ||||||| | Sbjct 45885 GATGCGGCGGACGGTGTCGGGATGCGCGCGGT-----GCTCGAGGTGGCTGAAGAG---C 45936 Query 127517 A--CA-GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCAC 127573 | || ||||| || ||| | |||||||| ||| |||||| || | |||||| Sbjct 45937 AGGCATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGGTGGAGAAGGTG 45996 Query 127574 AGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAG 127633 || || ||||||||||| || ||||| | |||||| |||| || ||||| ||||| Sbjct 45997 AGGCCGGGCATGAGACCGCGTTTCTTGAGCCAGAAGATCGATGCGAAGGAGCCCGAGAAA 46056 Query 127634 AAGATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTA 127693 ||||| |||| || | || || | || ||||| || |||| |||||| | Sbjct 46057 AAGATGCCCTTGACGGTGACAAAGGCGACGAGGCGCTCAGCGAAGG---TGGACTTGTCA 46113 Query 127694 TC---AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATC 127750 || | ||||||||| ||||| | ||||| |||| ||| || |||| ||||| || Sbjct 46114 TCTGAGATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGACG 46173 Query 127751 GCTTCAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAA 127810 || || ||||| | || | || || || ||||||| |||| ||||| || Sbjct 46174 GCGTCGAAGAGGTACTCGCGCTGTGCGGGGTCCGTGATGTAGGTATCAATGAG---GGAG 46230 Query 127811 TATGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 127869 || || ||| ||| | | | ||| |||| ||| | ||||||| |||| || || Sbjct 46231 TAGGTCTCGGAGTGAATGGTGTCCATCATGG-TCTGGAAGCCGTAGAAGCAGCGGGCCTC 46289 Query 127870 GCTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 127929 | || ||||| | | || | | || ||||| || || | ||| || Sbjct 46290 GGCGGCTTGGACCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATGCTATCCGA 46349 Query 127930 CCCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTT---CAGGGT 127986 | |||| || || || |||| | ||||| | |||| || ||||| | |||| Sbjct 46350 CGCAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGTTCGTTGTCGTTGAGCTGGGT 46409 Query 127987 CTTCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||||| | | ||||| || || || | || |||||| ||||| Sbjct 46410 GTTCCAGTCGACCATGTCCTTGGACAGGTCCATCTTCTCCGCTGTCCA 46457 >seq128 Length=238353 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 176798 GCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCA 176857 || ||||| ||||| | || ||||| |||||||| || ||| ||| |||||| || Sbjct 144428 GCCTCGCGTACATTAAGAAGTTTACCGCGCAGAGGGAAGACTCCGAAGTTATCACGCCCG 144369 Query 176858 ACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGC 176917 || || ||||||||||| || |||| ||| || || || || ||||| | || || Sbjct 144368 ACTACGCCTAGACCAGCAACAGCTAGGGCCTTTGCTGAGTCTCCTTCCGTTAGAATCAGG 144309 Query 176918 GTACACTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGG 176970 || || | || || |||||| || |||||||||||| |||| ||||| Sbjct 144308 GTGCAGTCCTTAGCATGCTTCGTCCCTGCATTGTTCGCATCGGCCAATTTGGG 144256 >seq92 Length=307622 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 117071 TGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCG 117130 |||| || ||||||| || || || ||| | || | ||||||||||||||||||| Sbjct 59710 TGAGCGTGTCGTAGATGCCTTCAATGCTGTCGTCTTTCATGGCGATGAGGAAGCAGCTCG 59651 Query 117131 ACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC 117190 ||||||| || ||||| || ||||||||||| || || | ||||| |||| || Sbjct 59650 ACATTTGCGGGTGCGGTGTGCCGGCGTTGAAGAGCGTGGGGGATGCGTGCGTGAAGTAAC 59591 Query 117191 CTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGA 117250 || |||||| | | ||| ||||| | ||| | ||| ||||| ||||| | Sbjct 59590 GTTCAGACATCATGTTGTACGTCTCGAGGACGTGCTCGAGGTCAGAACCGTGGATACCAA 59531 Query 117251 TTGAGACCCGCATAAACATGTATTGGGG 117278 | ||||||||| | || || ||| || Sbjct 59530 CGGCGACCCGCATGAGCAAGTGTTGCGG 59503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613492521840240