Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq173 205 1e-47 seq92 154 2e-32 seq362 143 4e-29 >seq173 Length=183199 Score = 205 bits (226), Expect = 1e-47 Identities = 568/862 (66%), Gaps = 23/862 (3%) Strand=Plus/Minus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 |||| ||| | |||||| ||||||||| ||||| |||||||||| || ||| || Sbjct 161681 CTTCGAGTAGTCCGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCAT 161622 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 |||||||| |||| |||||| | |||| || ||| |||||| | | | || Sbjct 161621 GTCCATGAAGTCGAAGGGGTTCGTGACGTTGTACACCTTGTCGTTTCCGAGGGACACGAG 161562 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807 || | ||| || || || |||||||| ||||| | || |||| || || | || Sbjct 161561 CAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAG 161502 Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867 | | ||||||||||||| || ||||||| ||| || |||| || || || | || Sbjct 161501 CTTGCACGGGAGCGCTTCCGTGAGGAACTCCTGCTCGATGGCGACGGCGTCCGTGATGAT 161442 Query 159868 -CTGCGAGACACGTTCG---TACCC-CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGG 159922 | ||| ||| ||| | | | |||| || || ||| | || || ||| Sbjct 161441 GCGGCG-GACGGTGTCGGGGTGCGCGCGGC--GCT-----TGAGGTGGCTGAAGAGCAGG 161390 Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982 || ||||||||| ||||| |||||||| || ||||| ||||||||| | | ||||| Sbjct 161389 CATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGG 161330 Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAG 160042 || ||||||| || ||| |||||||| || |||| |||||| | || || ||| Sbjct 161329 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAG 161270 Query 160043 ATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGG 160102 || ||||| ||||| ||||| || ||||| | ||| | || | || ||| || | Sbjct 161269 ATGCCCTCGACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGGTGGACTTGTCATCTGAG 161210 Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTA 160162 ||||| | ||||||| || |||||||| |||||| || ||| ||||||||||| Sbjct 161209 ATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCG 161150 Query 160163 AACAATCTGTCCTGCTCCTTCAC---ATCCTTGATCAGAGTAGCAATCAGCTTCGAGTAC 160219 || | || || || ||| |||||||| || | || || ||||| Sbjct 161149 AAGA---GGTACTCGCGCTGCACGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAG 161093 Query 160220 ATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC--CA 160277 | || | ||| | || || || ||||| ||| |||||| | ||||| | Sbjct 161092 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCG 161033 Query 160278 GATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGG 160337 | | || ||||| | | ||||| | | | || || | || || | || |||| | Sbjct 161032 GCT--TGGACCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACG 160975 Query 160338 CCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTT 160397 | || ||||| || | ||||| |||||||| || | |||| | |||||| | | | Sbjct 160974 CAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGTTCGTTGTCGTTGAGCTTGGTGT 160915 Query 160398 CCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAG 160457 ||||| || ||| | || || || | ||| ||||| |||| | ||||| | Sbjct 160914 TCCAGTCAACCATGTCCTTGGACAGGTCCATCTCCTCCGCTGTCCAGAAAGAAGCCTCGG 160855 Query 160458 CAGTTTTGTACATGGCCCAGAT 160479 | | |||||||| |||||| Sbjct 160854 CCTTCTTGTACATTTGCCAGAT 160833 Score = 89.7 bits (98), Expect = 8e-13 Identities = 176/257 (68%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 159913 AAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGA 159972 ||||| | ||| |||||||| |||| |||||||||||| || | ||||||||| Sbjct 159140 AAACAACATGCAGGCAAAGTCAGTATGCATCCCCTCGTCCCGACTTATCAGCTCGTTGGA 159199 Query 159973 CATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAA--AGCA 160030 | | || || ||||| | ||||||| || ||||| |||||| ||||| ||| Sbjct 159200 GAATGTTAGCCCGGGCATCAGCCCACGCTTCTTCAGCCAGAAAATGCTTGCAAAGGAGC- 159258 Query 160031 CCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCG 160090 ||| || ||| || ||||| || || || ||||| || || | ||| | || | | | Sbjct 159259 CCGAGAAGAAA-ATGCCCTCGACCGCGGCGAACGCTACCAGTCGCTCCGCGAACGTCGAG 159317 Query 160091 TTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGC 160150 | ||| | |||||| |||||| || |||||||| ||| ||||| ||| | Sbjct 159318 CGCGCGTCGGAGATCCACCGGAGGGCCCACTCCGCCTTCTTCTTGATACACGGGATGGTC 159377 Query 160151 TCGACGGCGTTAAACAA 160167 || | |||| ||||| Sbjct 159378 TCTATTGCGTGGAACAA 159394 >seq92 Length=307622 Score = 154 bits (170), Expect = 2e-32 Identities = 457/690 (66%), Gaps = 16/690 (2%) Strand=Plus/Minus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 ||| ||| || || ||||||| || | | |||||||| || | | ||| |||||||||| Sbjct 61421 TCTGGTCAACAGTAAACTGAACCGCCTGCGCGGCAGGCTTGGTGCGCAGGTAGTACATGC 61362 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || ||||||| ||| ||||| | |||||| | ||| | | || | | | Sbjct 61361 CTGTCTTGAGACCCTTCTTCCAGCCGTAGAAATGCATGCTCGTCAGCTGCCCCATGGTCG 61302 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 | | || || ||||| || ||||| ||| |||| |||||||| || || || Sbjct 61301 GCGCCTGCAGATGTATGTTGAGGGACTGCGACTGGCAGATG-AAGGCGCCACGGTCCGCT 61243 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 || | | ||| | |||||||||| ||||||||||| |||||| | | || || || Sbjct 61242 GCGAGGTCGATGACCTTCTTCTGCGAGATCTCCCACACGGTCTTGTAGATCGCCT-TGAC 61184 Query 204076 GT-GTTGAGGCACATCTT-CCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCAT 204132 || || | || || || | | ||| || ||||| |||| || || | | | Sbjct 61183 GTCGTCGGGG---ATGTTGGGGATATTCTGAATGGAGCCATTGTGTGCAATGATCATGTT 61127 Query 204133 CCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192 | || ||| || |||| | ||| | || ||||| |||| || ||| | Sbjct 61126 CTTCATCTGGTCGTCCCAAAGGCCGAGGTCGACGAGCTCACGCAGCAACCATGGGCAAAC 61067 Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252 ||||| || ||||||| ||||| | |||||| | | ||| ||||| | || ||||| Sbjct 61066 TATCTGGAACTCTCCGGCGAGCACACGACGGGTGTAGATGTTACTGGTGTACGGCTCGAA 61007 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 |||||||||||| | ||||| |||| |||||||||||||| || |||||| Sbjct 61006 GCACTCGTTGTTGCCCAGGATCTGGCTGGTGGATGCCGTGGGCATGGGCGCACAGAGCAG 60947 Query 204313 GGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCA--TC 204370 || || | || |||| || || | ||| || | ||||||| || || Sbjct 60946 GGCATTCCTCAGGCCGTGTTCGGCGATATTCGCCTTGAGTGTCCTCCAGTCCCACAGGTC 60887 Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTG-ACTGGGCTGCC 204429 | | ||| | |||||||||| ||||||||| || |||| ||| | ||||| || Sbjct 60886 GGA--GGGCGTAACGCCCCACAGGTCGAACTG-CAGCTGCCCCTGCTGCGCCGGGCTTCC 60830 Query 204430 CTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTG 204489 | | || | || || ||||| | ||| ||| ||| ||||| | | || Sbjct 60829 CACCCAAGTGGAGTACGGACCATCCTTGACGGCCTGCTCGCAAGAGGCCTCGAGAGCACC 60770 Query 204490 ATAGTACATGGTCTCAAAGATCTGAACGTT 204519 | ||| || ||||| |||||||||| ||| Sbjct 60769 GTGGTAGATCGTCTCGAAGATCTGAATGTT 60740 >seq362 Length=48712 Score = 143 bits (158), Expect = 4e-29 Identities = 359/538 (67%), Gaps = 13/538 (2%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 |||| ||| | |||||| ||||||| |||||| |||||||||| || ||| || Sbjct 45648 CTTCGAGTAGTCCGACACGCCTTTCTCGAGAAAGTTCGTCTTGCCCTGCAGGGAAATCAT 45707 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 |||| ||| | || || || | || | || ||| ||||| | | | || Sbjct 45708 ATCCACGAAGTCAAAGGGATTTGTGACATTGTACACCTTGTCGTTCCCGAGGGACACGAG 45767 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807 || | ||| || | || | |||||| ||||| | || |||| || || | || Sbjct 45768 CAGGCGGTCCGCGAAGAACTTGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAG 45827 Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867 | || |||||| |||||| || ||||||| |||||| |||| || || || | || Sbjct 45828 CTTACACGGGAGCACTTCCGTGAGGAACTCCTGCTCAATGGCGACGGCGTCCGTGATGAT 45887 Query 159868 -CTGCGAGACACGTTCG---TACCC-CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGG 159922 | ||| ||| ||| | | | ||| ||| | | |||| | || || ||| Sbjct 45888 GCGGCG-GACGGTGTCGGGATGCGCGCGG--TGCTCGAG--GTGGC---TGAAGAGCAGG 45939 Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982 || ||||||||| ||||| |||||||| || ||||| |||| |||| | | ||||| Sbjct 45940 CATGCAAAGTCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGGTGGAGAAGGTGAGG 45999 Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAG 160042 || ||||||| || || |||||||| || || | || || | || |||||| Sbjct 46000 CCGGGCATGAGACCGCGTTTCTTGAGCCAGAAGATCGATGCGAAGGAGCCCGAGAAAAAG 46059 Query 160043 ATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGG 160102 || |||| |||| |||| || ||||| | |||| | || | || ||| || | Sbjct 46060 ATGCCCTTGACGGTGACAAAGGCGACGAGGCGCTCAGCGAAGGTGGACTTGTCATCTGAG 46119 Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 ||||| | ||||||| || |||||||| ||||||||| ||| ||||||||||| Sbjct 46120 ATCCACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGACGGCGT 46177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795136175911840