Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq174 138 3e-27 seq114 125 2e-23 seq41 104 6e-17 seq49 96.9 8e-15 seq85 87.8 4e-12 >seq174 Length=181799 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||||||||| |||||||| |||| |||||||| | | || | |||||| Sbjct 45323 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGTCCATCC 45382 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || |||||||||||||| ||||| ||| || || || ||| Sbjct 45383 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCC 45442 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||| ||| |||| |||||| | | ||| || || | || || ||| Sbjct 45443 TGAATCTTTGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACCTCGAGGGTAATGGTC 45502 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || ||||| Sbjct 45503 TTGCCCGTCAGGGTCTTGACGAAGATTTG 45531 Score = 127 bits (140), Expect = 5e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||| || || ||||||||||| |||| ||||||||| | | ||| | ||||| || | Sbjct 45608 CAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAA 45667 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| |||||||||||||| ||||| || || ||| ||| || || ||||| | Sbjct 45668 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGA 45727 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| |||| ||||| | | || || || | ||||||||||| | Sbjct 45728 TCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGC 45787 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||| || || || || || || Sbjct 45788 CCGTGAGGGTCTTGACGAAGATCTG 45812 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| || || ||||| ||||| || |||| |||||| || | | || Sbjct 45086 CGGAGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGTG 45145 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||| || ||||| ||||| |||||||| ||||| ||| || || Sbjct 45146 CGACCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCCC 45205 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||||||| |||| |||||| | || || || || | Sbjct 45206 TCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGA 45265 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || || ||||| || || Sbjct 45266 GTGATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTG 45303 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||||| |||||| || | | |||| ||||| || ||||| Sbjct 44875 GTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGAGCTG 44934 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || |||||||| |||||||||||||| ||| || || || ||||| ||||| Sbjct 44935 CTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTT 44994 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| || | ||||| | | || || || | ||||| ||||| ||||| Sbjct 44995 CGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTCCCGT 45054 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| || Sbjct 45055 TAGGGTCTTAACGAAAATCTG 45075 >seq114 Length=262464 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||| |||||||| |||| ||||||||| | | || | || || Sbjct 228722 AGGACGAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 228781 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| |||||||||||||| ||||| ||||| || || || || ||| Sbjct 228782 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCC 228841 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||| | | || || || | |||||| ||| Sbjct 228842 TGGATCTTGGCCTTGACGTTGTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTC 228901 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| || || Sbjct 228902 TTGCCGGTGAGGGTCTTGACAAAGATCTG 228930 Score = 109 bits (120), Expect = 1e-18 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||||||||| || |||||| || | ||||||||| || || | || || || | Sbjct 228498 CAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGA 228557 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| |||||||||||||| ||||||||||| || || || || ||||| | Sbjct 228558 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGA 228617 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| || |||| |||||| | | || || || | |||||| ||||| | Sbjct 228618 TCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGC 228677 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || || || || ||||| Sbjct 228678 CGGTGAGGGTCTTGACGAAGATTTG 228702 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || ||||| || |||||||| |||| ||||||||| | || || | || || Sbjct 228950 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCC 229009 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| ||||||||||| | |||||||||||| || Sbjct 229010 TCGAGCTGCTTCCCGGCGAAGATCAAACGCTGCTGGTCTGG 229050 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| |||| |||||| || | || || | ||||| Sbjct 229232 AGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGGCCATCC 229291 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| ||||||||||| |||||||||||||| || Sbjct 229292 TCGAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGGTCGGG 229332 >seq41 Length=470795 Score = 104 bits (114), Expect = 6e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| || |||||||| |||| ||||||||| | | || | |||||| Sbjct 242669 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 242728 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || |||||||| ||||||||||| |||||||||||||| ||| Sbjct 242729 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGA 242770 >seq49 Length=440159 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | ||| ||||||||||||| ||||||||| || || | |||||| Sbjct 335863 AGGACCAAGTGCAAAGTGGACTCCTTTTGGATGTTGTAGTCGCTCAGTGTGCGTCCATCC 335922 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || || |||||||||||||||||||| || Sbjct 335923 TCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGG 335963 >seq85 Length=318930 Score = 87.8 bits (96), Expect = 4e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | || ||| || ||||| ||||||||||| |||||||||||||| | | || Sbjct 169709 CGGAGACACAAGACGAGATGGAGGGTCGACTCCTTCTGGACGTTGTAGTCGGAGAGGGTG 169650 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | | || || |||||||| || ||||||||||| ||||| ||||| | || || Sbjct 169649 CGGCGGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGTTGGTCGAGCGGGATGCCC 169590 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 || | ||||| ||||| ||| ||| |||| || ||| Sbjct 169589 TCCTGGTCCTGGATCTTCGCCTTGACGTTGTCGATGGAGTC 169549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178892689158238