Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq173 136 5e-27 seq362 114 2e-20 seq144 98.7 1e-15 seq92 82.4 9e-11 >seq173 Length=183199 Score = 136 bits (150), Expect = 5e-27 Identities = 180/246 (73%), Gaps = 8/246 (3%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| || ||| || | || | || || || | ||||| || || ||||| |||||| Sbjct 161145 CTCTTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCCATGAAG 161204 Query 102150 TGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||| | ||| ||||| |||| ||||| || ||| |||| ||||| || Sbjct 161205 TGGATCTCAGATGACAAGTCCA---CCTTCGCTGAACGCCTCGTCGCCTTTGCCGCCGTC 161261 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCT 102265 ||||| ||||||||||| || ||||| |||| | || | |||||||||||||| ||||| Sbjct 161262 GAGGGCATCTTCTTCTCGGGCTCCTT-TGCGTCCATCTTCTGGCTCAAGAAGCGCGGTCT 161320 Query 102266 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGA 102325 |||||| || ||| ||||||||||||||| ||| || |||||||| | ||| || Sbjct 161321 CATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCGACGAGGGGATGCACACCGA 161380 Query 102326 GTTTGC 102331 ||||| Sbjct 161381 CTTTGC 161386 >seq362 Length=48712 Score = 114 bits (126), Expect = 2e-20 Identities = 173/245 (71%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| || ||| || | || | || || || | ||||| || || ||||| |||||| Sbjct 46184 CTCTTCGACGCCGTCGAGACCATCCCGTGCATCAAGAAGAAGGCCGACTGGGCCATGAAG 46125 Query 102150 TGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||| | ||| ||||| |||| |||||||| ||| |||| |||| || Sbjct 46124 TGGATCTCAGATGACAAGTCCA---CCTTCGCTGAGCGCCTCGTCGCCTTTGTCACCGTC 46068 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 102266 |||| ||||| ||||| || |||||| | || | ||||||||||| || |||||| Sbjct 46067 AAGGGCATCTTTTTCTCGGGCTCCTTCGCATCGATCTTCTGGCTCAAGAAACGCGGTCTC 46008 Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAG 102326 ||||| || ||| |||||||| |||||| ||| || |||||||| | ||| || Sbjct 46007 ATGCCCGGCCTCACCTTCTCCACCGAGCTCATCAGCCGCGACGAGGGGATGCACACCGAC 45948 Query 102327 TTTGC 102331 ||||| Sbjct 45947 TTTGC 45943 >seq144 Length=208183 Score = 98.7 bits (108), Expect = 1e-15 Identities = 109/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||| |||||||| ||| || | ||||| || |||| ||||||||||| || |||| Sbjct 50503 CCTTCGCTGAGCGCCTCGTCACCTTTGCCGCCGTCGAGGTCATCTTCTTCTCGGGCTCCT 50562 Query 102232 TCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || ||| | || | ||||| |||||||| |||||||||| || ||| ||||||||| Sbjct 50563 TC-GCGTCCATCTTCTGGCTGAAGAAGCGCGGTCTCATGCACGGCCTCAATTTCTCCAAC 50621 Query 102291 GAGCTTATCTCTCGTGACGAGGG 102313 ||| | ||| | | |||||||| Sbjct 50622 GAGATCATCGCCCACGACGAGGG 50644 >seq92 Length=307622 Score = 82.4 bits (90), Expect = 9e-11 Identities = 170/253 (67%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 || || ||||||||||||| | |||||||| || || | || || | |||| Sbjct 59510 ACTTGCTCATGCGGGTCGCCGTTGGTATCCACGGTTCTGACCTCGAGCACGTCCTCGAGA 59569 Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738 | ||| ||| |||||| || |||| |||||| | || || ||||||||||| | Sbjct 59570 CGTACAACATGATGTCTGAACGTTACTTCACGCACGCATCCCCCACGCTCTTCAACGCCG 59629 Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798 | ||||| || |||||||| || || ||||| || || | || || || || Sbjct 59630 GCACACCGCACCCGCAAATGTCGAGCTGCTTCCTCATCGCCATGAAAGACGACAGCATTG 59689 Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858 | ||||| |||| ||| |||| |||||| ||| || |||||||| || | Sbjct 59690 AAGGCATCTACGACACGCTCAAGAGCTGTGCCATGATCAGCAAAACCGCTGGTGGCATTG 59749 Query 111859 GGATGCACATCCA 111871 || || ||||||| Sbjct 59750 GGCTGAACATCCA 59762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620727548738080