Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq173 116 4e-21 seq439 87.8 2e-12 >seq173 Length=183199 Score = 116 bits (128), Expect = 4e-21 Identities = 544/850 (64%), Gaps = 28/850 (3%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 ||||| ||| | ||| |||||||| |||||||| || | || ||||| | ||||| Sbjct 161674 TAGTCCGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCATGTCCATG 161615 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCA---ACTTGTTTCAGAAG 119323 ||||| || || || || ||| | | | || ||| | | || | || || Sbjct 161614 AAGTCGAAGGGGTTCGTGACGTTGTACACCTTGTCGTTTCCGAGGGACACG----AGCAG 161559 Query 119324 ACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATT 119383 || || | ||| ||||||| || | | |||| ||||| ||||| || ||||| || Sbjct 161558 GCGGTCCGCGACGAACTCGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAGCTT 161499 Query 119384 ACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGA 119443 |||||||| || || || ||| | || |||||| | || || || | | |||| Sbjct 161498 GCACGGGAGCGCTTCCGTGAGGAACTCCTGCTCGATGGCGACGGCGTCCGTGATGATGCG 161439 Query 119444 GTGAATAGTTTCTGTCGATG-GTTTGTTTCTCAAGA-GTTTAAACAACTCTACGGCAAAT 119501 | | | || || | | || | | || || | | || | | ||||| Sbjct 161438 GCGGACGGTGTCGG--GGTGCGCGCGGCGCTTGAGGTGGCTGAAGAGCAGGCATGCAAAG 161381 Query 119502 TCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATG 119561 || || | ||| || || || ||||||||| || |||| || || |||||| Sbjct 161380 TCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATG 161321 Query 119562 AGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCC 119621 || || | ||||| ||||| ||||||| ||| || || |||||||||||||| Sbjct 161320 AGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAGATGCCCTCG 161261 Query 119622 ACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTC------GAACCAC 119675 || ||| || |||| || || ||||| ||||| |||||||| || |||| Sbjct 161260 ACGGCGGCAAAGGCGACGAGGCGTTCAGC-GAAGGT--GGACTTGTCATCTGAGATCCAC 161204 Query 119676 TTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGT 119735 || | ||||||| |||||| || ||||| |||| || | || ||| ||||| || Sbjct 161203 TTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAAGAGG 161144 Query 119736 TGCT-TCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACC 119794 | || | | || | ||||| || || | || ||||| ||||||||||| Sbjct 161143 TACTCGCGCTGCA-CGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGA 161085 Query 119795 ATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCA 119853 || | | | ||| || ||| || | || || |||| || |||| ||| | Sbjct 161084 GTGGATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCTTGGA 161026 Query 119854 CTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGA 119913 | |||| | || | || || || || || |||||||| ||||||||| Sbjct 161025 CCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACGCAGCGAAGA 160966 Query 119914 ATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG---TGTTTTCCAGTCGT 119970 | || | || || ||||| | |||| || |||||||| || |||||||| Sbjct 160965 AGGCGAGGACGTGGGAGATGAAGTGACGTTCGTTGTCGTTGAGCTTGGTGTTCCAGTCAA 160906 Query 119971 CCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTAT 120030 |||| || || |||| ||||| ||| || ||||||||| ||| || ||||| || | Sbjct 160905 CCATGTCCTTGGACAGGTCCATCTCCTCCGCTGTCCAGAAAGAAGCCTCGGCCTTCTTGT 160846 Query 120031 AGAGTTCCCA 120040 | | || ||| Sbjct 160845 ACATTTGCCA 160836 >seq439 Length=31570 Score = 87.8 bits (96), Expect = 2e-12 Identities = 215/323 (67%), Gaps = 5/323 (2%) Strand=Plus/Minus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647 || |||| |||||||| || || |||||||||| ||| || ||||| |||||| Sbjct 23507 TGCCGAACCCGTCCATCTCCACCAGCAGCTGGTTGAGCGTGGACTCCCGCTCGTCGTTGC 23448 Query 11648 AGGGCA---TACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATA 11704 | | | || || || |||| ||| |||| ||||| || || |||| ||| | Sbjct 23447 CGCCAAAGTTGCCGCCCTGCGCACGCGCCTTGCCGATGGCGTCGATTTCGTCGACGAAGA 23388 Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764 ||| || || ||| |||| | |||| || || || || || || || | Sbjct 23387 TGATGCAGGGCGCGTTCTTCTTCGCCTCTGCGAAGAGGTCGCGGACGCGGGAGGCGCCGA 23328 Query 11765 CACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGAC 11823 |||| ||||||||||| ||||| | | | | || ||| || | |||||| || | | Sbjct 23327 CACCGACGAACATCTCGACGAACTCGGAGCCGGA-CACGGAGAGGAAGGGGACGGAGGCC 23269 Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 || || || | || ||||| || || || ||||||||||| | || | ||| | | Sbjct 23268 TCGCCGGCAGTCGCCTTGGCGAGCAGCGTTTTGCCCGTACCAGGGGGGCCGGAGAGGATG 23209 Query 11884 GCGCCACGGGGGATCTTGGCACC 11906 ||||| || || ||||| || || Sbjct 23208 GCGCCGCGAGGAATCTTTGCGCC 23186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961908749200