Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335.
1_202016-04-25] 1,914 sequences; 95,118,143 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq173 116 4e-21
seq439 87.8 2e-12
>seq173
Length=183199
Score = 116 bits (128), Expect = 4e-21
Identities = 544/850 (64%), Gaps = 28/850 (3%)
Strand=Plus/Minus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
||||| ||| | ||| |||||||| |||||||| || | || ||||| | |||||
Sbjct 161674 TAGTCCGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCATGTCCATG 161615
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCA---ACTTGTTTCAGAAG 119323
||||| || || || || ||| | | | || ||| | | || | || ||
Sbjct 161614 AAGTCGAAGGGGTTCGTGACGTTGTACACCTTGTCGTTTCCGAGGGACACG----AGCAG 161559
Query 119324 ACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATT 119383
|| || | ||| ||||||| || | | |||| ||||| ||||| || ||||| ||
Sbjct 161558 GCGGTCCGCGACGAACTCGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAGCTT 161499
Query 119384 ACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGA 119443
|||||||| || || || ||| | || |||||| | || || || | | ||||
Sbjct 161498 GCACGGGAGCGCTTCCGTGAGGAACTCCTGCTCGATGGCGACGGCGTCCGTGATGATGCG 161439
Query 119444 GTGAATAGTTTCTGTCGATG-GTTTGTTTCTCAAGA-GTTTAAACAACTCTACGGCAAAT 119501
| | | || || | | || | | || || | | || | | |||||
Sbjct 161438 GCGGACGGTGTCGG--GGTGCGCGCGGCGCTTGAGGTGGCTGAAGAGCAGGCATGCAAAG 161381
Query 119502 TCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATG 119561
|| || | ||| || || || ||||||||| || |||| || || ||||||
Sbjct 161380 TCGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATG 161321
Query 119562 AGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCC 119621
|| || | ||||| ||||| ||||||| ||| || || ||||||||||||||
Sbjct 161320 AGACCGCGCTTCTTGAGCCAGAAGATGGACGCAAAGGAGCCCGAGAAGAAGATGCCCTCG 161261
Query 119622 ACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTC------GAACCAC 119675
|| ||| || |||| || || ||||| ||||| |||||||| || ||||
Sbjct 161260 ACGGCGGCAAAGGCGACGAGGCGTTCAGC-GAAGGT--GGACTTGTCATCTGAGATCCAC 161204
Query 119676 TTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGT 119735
|| | ||||||| |||||| || ||||| |||| || | || ||| ||||| ||
Sbjct 161203 TTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAAGAGG 161144
Query 119736 TGCT-TCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACC 119794
| || | | || | ||||| || || | || ||||| |||||||||||
Sbjct 161143 TACTCGCGCTGCA-CGGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGA 161085
Query 119795 ATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCA 119853
|| | | | ||| || ||| || | || || |||| || |||| ||| |
Sbjct 161084 GTGGATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCTTGGA 161026
Query 119854 CTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGA 119913
| |||| | || | || || || || || |||||||| |||||||||
Sbjct 161025 CCTCGTTCGAGAACCGCTCAACGAGGTTCTCGTTGACGATACCATCGGACGCAGCGAAGA 160966
Query 119914 ATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG---TGTTTTCCAGTCGT 119970
| || | || || ||||| | |||| || |||||||| || ||||||||
Sbjct 160965 AGGCGAGGACGTGGGAGATGAAGTGACGTTCGTTGTCGTTGAGCTTGGTGTTCCAGTCAA 160906
Query 119971 CCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTAT 120030
|||| || || |||| ||||| ||| || ||||||||| ||| || ||||| || |
Sbjct 160905 CCATGTCCTTGGACAGGTCCATCTCCTCCGCTGTCCAGAAAGAAGCCTCGGCCTTCTTGT 160846
Query 120031 AGAGTTCCCA 120040
| | || |||
Sbjct 160845 ACATTTGCCA 160836
>seq439
Length=31570
Score = 87.8 bits (96), Expect = 2e-12
Identities = 215/323 (67%), Gaps = 5/323 (2%)
Strand=Plus/Minus
Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647
|| |||| |||||||| || || |||||||||| ||| || ||||| ||||||
Sbjct 23507 TGCCGAACCCGTCCATCTCCACCAGCAGCTGGTTGAGCGTGGACTCCCGCTCGTCGTTGC 23448
Query 11648 AGGGCA---TACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATA 11704
| | | || || || |||| ||| |||| ||||| || || |||| ||| |
Sbjct 23447 CGCCAAAGTTGCCGCCCTGCGCACGCGCCTTGCCGATGGCGTCGATTTCGTCGACGAAGA 23388
Query 11705 CGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAA 11764
||| || || ||| |||| | |||| || || || || || || || |
Sbjct 23387 TGATGCAGGGCGCGTTCTTCTTCGCCTCTGCGAAGAGGTCGCGGACGCGGGAGGCGCCGA 23328
Query 11765 CACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGAC 11823
|||| ||||||||||| ||||| | | | | || ||| || | |||||| || | |
Sbjct 23327 CACCGACGAACATCTCGACGAACTCGGAGCCGGA-CACGGAGAGGAAGGGGACGGAGGCC 23269
Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883
|| || || | || ||||| || || || ||||||||||| | || | ||| | |
Sbjct 23268 TCGCCGGCAGTCGCCTTGGCGAGCAGCGTTTTGCCCGTACCAGGGGGGCCGGAGAGGATG 23209
Query 11884 GCGCCACGGGGGATCTTGGCACC 11906
||||| || || ||||| || ||
Sbjct 23208 GCGCCGCGAGGAATCTTTGCGCC 23186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588961908749200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |