Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq173 114 2e-20 seq128 82.4 9e-11 >seq173 Length=183199 Score = 114 bits (126), Expect = 2e-20 Identities = 354/539 (66%), Gaps = 24/539 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 |||||| || |||||||| |||||||| ||||| || | ||| || | ||||| Sbjct 161674 TAGTCCGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGGGAGATCATGTCCATG 161615 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAATGG-GTGGCACCCCA---ACTTGTTTGAGGAG 117101 ||||| || || ||| | |||| | | || | || | || | || || Sbjct 161614 AAGTCGAAGGGGTTCGTGACGTTGTACACCTTGTCGTTTCCGAGGGACACG----AGCAG 161559 Query 117102 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATT 117161 || |||| || |||| ||||||| | |||| || |||||||| |||||||| || Sbjct 161558 GCGGTCCGCGACGAACTCGATGTACTGGCACATGAGGTCCGAGTTCATGCCGATGAGCTT 161499 Query 117162 ACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGC 117221 || ||||| || ||| || |||| | | ||| || | || || || | | |||| Sbjct 161498 GCACGGGAGCGCTTCCGTGAGGAACTCCTGCTCGATGGCGACGGCGTCCGTGATGATGCG 161439 Query 117222 GTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCT-TGAAGAGCTCCACGGCAAACT 117280 | ||| || |||| ||| | | | || |||||||| ||||| | Sbjct 161438 GCGGACGGTGTCGGG-GTGCGCGCGGCGCTTGAGGTGGCTGAAGAGCAGGCATGCAAAGT 161380 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||| | ||||| || ||| || || || || |||||| ||||| ||||||| Sbjct 161379 CGGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 161320 Query 117341 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 117399 |||| |||||||| | ||| | || | |||| || || || ||||||||||| ||||| Sbjct 161319 GACCGCGCTTCTTGAGCCAGAAGATGGACGCA-AAGGAGCCCGAGAAGAAGATGCCCTCG 161261 Query 117400 ACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA------AAC 117453 || ||||| || | ||||| || ||||||| | |||| ||||| | | Sbjct 161260 ACGGCGGCAAAGGCGACGAGGCGTTCAGCGAAGGTG---GACT---TGTCATCTGAGATC 161207 Query 117454 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 || ||||| ||||| | |||||||||| || || || | || | || ||| || || Sbjct 161206 CACTTCATGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATGGTCTCGACGGCGTCGAA 161148 >seq128 Length=238353 Score = 82.4 bits (90), Expect = 9e-11 Identities = 202/305 (66%), Gaps = 10/305 (3%) Strand=Plus/Minus Query 169214 ATCTGTCATAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCC 169273 ||| ||||||||||| | | ||||| || || | ||| ||| ||||| Sbjct 144555 ATCCGTCATAATCATCAATTGGCCATATCGCAGGCTGCTAGTATCAGAGTATTCTTTGTT 144496 Query 169274 TTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTT-----TGATGTGAGC 169328 || || ||||||| ||||||||||| | | | ||| | || |||| ||| | Sbjct 144495 GTGCTGCAGACCCATGATCTTCTTGATGTTTTGTATCTCCTCATTCTTCATGATCTGATC 144436 Query 169329 TGTGCCACTGAAGCGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAG 169388 ||| | | || ||||| ||||| | || || || ||||| ||||| || || Sbjct 144435 -GTGACGC----GCCTCGCGTACATTAAGAAGTTTACCGCGCAGAGGGAAGACTCCGAAG 144381 Query 169389 TGATCACGTCCAACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCC 169448 | |||||| || || ||| ||||| || || || |||| || ||||| || || ||| Sbjct 144380 TTATCACGCCCGACTACGCCTAGACCAGCAACAGCTAGGGCCTTTGCTGAGTCTCCTTCC 144321 Query 169449 GTGACAATGAGGGTACACTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAAC 169508 || | ||| ||||| || | || ||| ||| || || ||||| || ||| |||| Sbjct 144320 GTTAGAATCAGGGTGCAGTCCTTAGCATGCTTCGTCCCTGCATTGTTCGCATCGGCCAAT 144261 Query 169509 TTGGG 169513 ||||| Sbjct 144260 TTGGG 144256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589966684709360