Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq174 170 4e-37 seq114 118 2e-21 seq85 96.9 8e-15 seq41 93.3 9e-14 >seq174 Length=181799 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || |||||||| |||| ||| || | ||||| ||| Sbjct 45326 ACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGCGTGCGTCCATCCTCG 45385 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || |||||||| ||||| ||||| || || || ||| Sbjct 45386 AGCTGCTTGCCAGCAAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGA 45445 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||||||||| || |||||||| || ||| || || ||||||| ||||| Sbjct 45446 ATCTTTGCCTTGACGTTGTCGATGGTGTCGGAGGATTCAACCTCGAGGGTAATGGTCTTG 45505 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 45506 CCCGTCAGGGTCTTGACGAAGATTTGCAT 45534 Score = 154 bits (170), Expect = 3e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||||| || ||||| || |||||||| | || || | ||||| |||||||| Sbjct 44875 GTGAAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTCCGGCCATCCTCGAGCTG 44934 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| |||||||||||||| || || ||||| ||||| || || || || || || || || Sbjct 44935 CTTCCCTGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGGATCTT 44994 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||| |||||||| || || |||||||| | |||||||| || Sbjct 44995 CGCCTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCAAGGGTGATGGTCTTTCCCGT 45054 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | || || ||||| | |||||| Sbjct 45055 TAGGGTCTTAACGAAAATCTGCATT 45079 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| || || || ||||| || || || ||||| |||| |||||| | ||||| || | Sbjct 45608 CAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAA 45667 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| || || ||||| || ||||||||||| || ||||| || | Sbjct 45668 GCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGA 45727 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||||||| || || ||||||||| || || || ||||| | |||||| | Sbjct 45728 TCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGC 45787 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || | || || ||||| | |||||| Sbjct 45788 CCGTGAGGGTCTTGACGAAGATCTGCATT 45816 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || |||||||||||||| || || |||||||| | || || | ||||| ||| Sbjct 45098 ACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCCTCG 45157 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || || || |||||||| || |||||||| ||||| ||||| || ||||| ||| Sbjct 45158 AGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGA 45217 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || |||||||| || || || || || || | ||||| Sbjct 45218 ATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTG 45277 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 45278 CCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 >seq114 Length=262464 Score = 118 bits (130), Expect = 2e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||| || ||| ||| || ||||| ||||| ||| || || | ||| || |||| Sbjct 228498 CAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTCGA 228557 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| || || || ||||| || || ||||| || ||||| || | Sbjct 228558 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGA 228617 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || |||||| || || |||||||| || || || || || || | ||||| | Sbjct 228618 TCTTCGCCTTGACATTGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGGTCTTGC 228677 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || || ||||| | |||||| Sbjct 228678 CGGTGAGGGTCTTGACGAAGATTTGCAT 228705 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || || || |||||||||| || || | ||||| |||||||| Sbjct 229240 GTGCAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGCGTGCGGCCATCCTCGAGCTG 229299 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||| || |||||||| || || || ||||| || || |||| Sbjct 229300 CTTGCCGGCGAAGATTAGACGCTGCTGGTCGGGGGGGATGC 229340 >seq85 Length=318930 Score = 96.9 bits (106), Expect = 8e-15 Identities = 119/163 (73%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| || || || || || ||||| || || | ||||| |||| || || | Sbjct 169707 GAGACACAAGACGAGATGGAGGGTCGACTCCTTCTGGACGTTGTAGTCGGAGAGGGTGCG 169648 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 | || ||||||||||| || |||||||| || || |||||||| | || ||||| || Sbjct 169647 GCGGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGTTGGTCGAGCGGGATGCCCTC 169588 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAA 195084 | ||| || || || ||||||||| || |||| ||||||| Sbjct 169587 CTGGTCCTGGATCTTCGCCTTGACGTTGTCGATGGAGTCCGAA 169545 >seq41 Length=470795 Score = 93.3 bits (102), Expect = 9e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| |||| || || | ||||||||| Sbjct 242672 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCG 242731 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || |||||||| || || || ||||| |||||||| Sbjct 242732 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAAT 242775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109454392044038