Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq174 104 2e-17 seq114 89.7 3e-13 >seq174 Length=181799 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| || ||||| || | || |||| || |||||||| |||||||| Sbjct 45116 TCTTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCCTCGAGCTGTTTGCCGGCAAAG 45175 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| ||||||| || ||| Sbjct 45176 ATAAGACGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTG 45235 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| || ||||| || || || || ||||| ||| Sbjct 45236 TCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTAAGCGTCTTGACA 45295 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 45296 AAGATCTGCATA 45307 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||||| | || |||| || ||||| || ||||| || Sbjct 45625 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 45684 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || || || | || | ||||||||||| |||||| |||||| Sbjct 45685 ATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 45744 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| ||| || || || |||||||| ||||| || Sbjct 45745 TCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACG 45804 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 45805 AAGATCTGCAT 45815 >seq114 Length=262464 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/215 (70%), Gaps = 9/215 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||||| || ||||||||||| ||||| || | || | || || Sbjct 228496 ACCAAGGTGGAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGCCCGTCCTC 228555 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || ||||| || || || || |||||||| | || | ||||||||||| Sbjct 228556 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 228615 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| ||||| || | ||||| ||| | ||| || |||| || |||| Sbjct 228616 GATCTTCGCCTTGAC--AT--TGTCGATGGTGTCAGACGACTCGACCTCGAGCGTGATGG 228671 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| ||||| || ||||| |||||| Sbjct 228672 TCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATA 228706 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || |||||||| || ||||| || Sbjct 228743 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 228802 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | |||||||| || ||||| |||||| Sbjct 228803 ATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTGACGT-- 228860 Query 34911 GCTATCGAT--TCACCGGC--CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | ||| || || | || ||||| || || ||||| ||||| Sbjct 228861 --TGTCGATAGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGGGTCTT 228918 Query 34967 CACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 228919 GACAAAGATCTGCAT 228933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324626027312592