Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq174 82.4 6e-11 >seq174 Length=181799 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || | ||| || ||| |||||| || || |||||||| || || | ||| Sbjct 45089 AGACGCAGGACGAGATGCAGAGTGGACTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGA 45148 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || |||||||| || || |||||||| || | || | ||||||| Sbjct 45149 CCATCCTCGAGCTGTTTGCCGGCAAAGATAAGACGCTGTTGGTCGGGAGGGATGCCCTCC 45208 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | || || | ||| ||||| | || Sbjct 45209 TTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTG 45268 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| |||||||| Sbjct 45269 ATGGTCTTGCCAGTAAGCGTCTTGACAAAGATCTGCAT 45306 Score = 82.4 bits (90), Expect = 6e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 48558 ACCAA-ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||| ||| ||||| ||| || || || ||||| || || ||| | || | || || Sbjct 45606 ACCAAGATGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTC 45665 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 | |||||| ||||| || || || ||||||||||| | |||| |||||||||||| Sbjct 45666 AAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGATCGGGAGGAATGCCCTCCTTGTCCTG 45725 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 ||||| || || | | | || || | ||| ||||| | || ||||| || Sbjct 45726 GATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGGGTGATCGTCTT 45785 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | || || || || |||||||| Sbjct 45786 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 45815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380928713916222