Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq173 219 8e-52 seq362 181 2e-40 seq92 114 2e-20 seq144 91.5 3e-13 seq6 87.8 3e-12 >seq173 Length=183199 Score = 219 bits (242), Expect = 8e-52 Identities = 559/843 (66%), Gaps = 30/843 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| || || ||||| || ||| Sbjct 160833 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGGAGATGGACCTG 160892 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATC-CAAAGAC---GAGCAGCATTTTCTCAA 25592 |||||||||||| | |||| || | | | | ||| ||| || | || || || Sbjct 160893 TCCAAGGACATGGTTGACTGGAACAC-CAAGCTCAACGACAACGAACGTCACTTCATCTC 160951 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || || || |||||||| || |||||||| || ||| | Sbjct 160952 CCACGTCCTCGCCTTCTTCGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTTGAGCG 161011 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||| | | || || || || |||||| || |||||||| |||||||| || Sbjct 161012 GTTCTCGAACGAGGTCCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 161071 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| || || || || || || ||||| | ||| Sbjct 161072 GGAGAACATCCACTCCGAGACCTACTCC---CTCCTCATCGACACCTACATCAAGGACCC 161128 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || || | || || || | ||| ||||| ||| || ||||||||| |||||| Sbjct 161129 CGTGCAGCGCGAGTACCTCTTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAGGC 161188 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCC-AGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 |||||||||||||||||| ||| | | | || || | || || || || | Sbjct 161189 CGACTGGGCCATGAAGTGGATCT-CAGATGACAAGTCCACCTTCGCTGAACGCCTCGTCG 161247 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| || || ||||||||||| ||| || || |||||| ||||||||||||||| Sbjct 161248 CCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCCTTTGCGTCCATCTTCTGGCTCA 161307 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||||||| || ||| |||||||||||||||||| | ||||||| Sbjct 161308 AGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCGACGAGG 161367 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTT---GCTCCACAAACCTT 26065 | | |||| || ||||| |||||||||| || ||||| | || || | | Sbjct 161368 GGATGCACACCGACTTTGCATGCCTGCTCTTCA---GCCACCTCAAGCGCCGC---GCGC 161421 Query 26066 CTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 | || |||||| | | ||||||| || || || | |||||| ||||||| | Sbjct 161422 ACCCCGACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATCGAGCAGGAGTTCCTCA 161481 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATT 26184 | ||||||||| | || |||||| |||| ||||| Sbjct 161482 CGGAAGCGCTCCCGTGCAAGCTCATCGGCATGAAC-TCGGACCTCATGTGCCAGTACATC 161540 Query 26185 GAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACG-- 26241 |||| || || |||| ||||| ||| | || ||| || || | |||| ||| Sbjct 161541 GAGTTCGTCGCGGACCGCCTGCTCGTGTC-CCTCGGAAACGACAAGGTGTACA--ACGTC 161597 Query 26242 CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301 | ||||| |||||||| ||||| | || || || | || ||||| |||||||| || Sbjct 161598 ACGAACCCCTTCGACTTCATGGACATGATCTCCCTGCAGGGCAAGACGAACTTCTTCGAG 161657 Query 26302 AAG 26304 ||| Sbjct 161658 AAG 161660 Score = 123 bits (136), Expect = 5e-23 Identities = 362/554 (65%), Gaps = 13/554 (2%) Strand=Plus/Minus Query 25489 TACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATG 25548 ||||||||||| ||| ||| ||||||||||| || || || || | ||||| Sbjct 159694 TACAAGAAGGCCCAAGCCTCCTTTTGGACCGCCGAGGAAATGGACCTCTCGCTCGACAT- 159636 Query 25549 GACGGC--TGGTACGCTC---TATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGG 25603 || || ||| | | | || || | |||| ||| ||| || | |||| | | Sbjct 159635 -ACAGCATTGGCGCACCCGCCTAACCCCTAATGAGCGGCACTTTATCTCGCACGTCCTTG 159577 Query 25604 CATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGG 25663 | ||||| || ||||| || || || ||||||||||| || ||| | || | | | Sbjct 159576 CCTTCTTCGCCGCCTCGGACGGCATCGTGAACGAGAACCTCGTTGAGCGCTTTTCGAACG 159517 Query 25664 AAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGC 25723 | || || || || || ||| |||||||| | ||||| |||| || || | Sbjct 159516 AGGTCAAGGTCGCCGAAGCGCGGTGCTTCTACGGCTATCAGATCATGGTCGAGAACGTCC 159457 Query 25724 ACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCGCCGAGAGAG 25780 |||| ||| || || || || || ||| || ||| |||||| | | Sbjct 159456 ACTCCGAGACATACTCC---CTCCTCATCGACACGCTGATCCAGGACTCGGCCGAGCGTG 159400 Query 25781 ATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCA 25840 |||| || || ||| ||| || | ||||||| ||||||| ||||||| Sbjct 159399 CGTACTTGTTCCACGCAATAGAGACCATCCCGTGTATCAAGAAGAAGGCGGAGTGGGCCC 159340 Query 25841 TGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTG 25900 | ||||||| | | | || | ||||| | ||||| |||||||| || || || | Sbjct 159339 TCCGGTGGATCTCCGACGCGCGCTCGACGTTCGCGGAGCGACTGGTAGCGTTCGCCGCGG 159280 Query 25901 TGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGA 25960 | |||||||| || ||| || || ||||| ||| |||||||| ||| || ||| Sbjct 159279 TCGAGGGCATTTTCTTCTCGGGCTCCTTTGCAAGCATTTTCTGGCTGAAGAAGCGTGGGC 159220 Query 25961 CCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAG 26020 ||||||||||| || ||||||||||| || || |||||||||| | || | | Sbjct 159219 TGATGCCCGGGCTAACATTCTCCAACGAGCTGATAAGTCGGGACGAGGGGATGCATACTG 159160 Query 26021 ATTTTGCCTGCCTG 26034 | ||||||||| || Sbjct 159159 ACTTTGCCTGCATG 159146 >seq362 Length=48712 Score = 181 bits (200), Expect = 2e-40 Identities = 435/649 (67%), Gaps = 13/649 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| || || |||| || ||| Sbjct 46493 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACAGCGGAGAAGATGGACCTG 46434 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTCAAG 25593 |||||||||||| || |||| || | | ||| ||| || | || || || Sbjct 46433 TCCAAGGACATGGTCGACTGGAACACCCAGCTCAACGACAACGAACGTCACTTCATCTCC 46374 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || || ||| | || || |||||||| || ||| | Sbjct 46373 CACGTCCTCGCCTTCTTCGCTGCGTCGGATAGCATCGTCAACGAGAACCTCGTTGAGCGG 46314 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | | || || || || |||||| || |||||||| ||||||| || Sbjct 46313 TTCTCGAACGAGGTCCAAGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGACCATGATG 46254 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || | | ||||| ||| || || || ||| || ||||| || ||| ||| Sbjct 46253 GACACCATTCACTCCGAGACCTACTCCCTCATT--GAT-ACCTACATCACGGACCCCGCA 46197 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 || | || || || | ||| ||||| ||| || ||||||||| |||||| Sbjct 46196 CAGCGCGAGTACCTCTTCGACGCCGTCGAGACCATCCCGTGCATCAAGAAGAAGGCCGAC 46137 Query 25834 TGGGCCATGAAGTGGATCAACAGCC-AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||||||||||||||| ||| | | | || || | ||||| || || ||||| Sbjct 46136 TGGGCCATGAAGTGGATCT-CAGATGACAAGTCCACCTTCGCTGAGCGCCTCGTCGCCTT 46078 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 || | || |||||||||||||| || || || || | ||||||||||||||| | Sbjct 46077 TGTCACCGTCAAGGGCATCTTTTTCTCGGGCTCCTTCGCATCGATCTTCTGGCTCAAGAA 46018 Query 25953 GAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 | | || | ||||||||| || ||| |||| ||||||||||||| | |||||||| Sbjct 46017 -ACGCGGTCTCATGCCCGGCCTCACCTTCTCCACCGAGCTCATCAGCCGCGACGAGGGGA 45959 Query 26012 TCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAG 26071 | |||| || ||||| |||||||||| || ||||| | ||| | || | Sbjct 45958 TGCACACCGACTTTGCATGCCTGCTCTTCA---GCCACCTCGAGCACCGCGCGCATCCCG 45902 Query 26072 AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 | |||||| | | ||||||| || || || | || ||| ||||||| Sbjct 45901 ACACCGTCCGCCGCATCATCACGGACGCCGTCGCCATTGAGCAGGAGTT 45853 >seq92 Length=307622 Score = 114 bits (126), Expect = 2e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 222044 AAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCG 222103 ||||| ||||||||||||| || | || | ||| | || || | ||||||| |||| Sbjct 60066 AAGAGATCCGGGATCCACAAAGCATAGAACAAATCACGGGCACGGTTCTCCTCCTTGCCG 60007 Query 222104 TTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACG 222163 | ||| ||||| || || | || || || |||||| ||||||| |||||||| |||| Sbjct 60006 TGGTTCTTCCTGAGGTCGATGAAATCGAAGATGTCATCGTGCCATGGCTCCAGGTAGATA 59947 Query 222164 GCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 || | ||||||||| ||||||||||| || || || || Sbjct 59946 GCGAAAGCGCCGGGGCGCTTGTTGCCTCCTTGGTCTAC 59909 >seq144 Length=208183 Score = 91.5 bits (100), Expect = 3e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 ||||| || || ||||||| || || |||| |||||| ||| || || || ||| || Sbjct 50511 GAGCGCCTCGTCACCTTTGCCGCCGTCGAGGTCATCTTCTTCTCGGGCTCCTTCGCGTCC 50570 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATC 25995 ||||||||||| ||| || || ||||| ||| || | || ||||||||| ||||| Sbjct 50571 ATCTTCTGGCTGAAGAAGCGCGGTCTCATGCACGGCCTCAATTTCTCCAACGAGATCATC 50630 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 | |||||||| | || | || ||||| |||| ||||| Sbjct 50631 GCCCACGACGAGGGGATGCATACCGACTTTGCATGCCCGCTCT 50673 >seq6 Length=777208 Score = 87.8 bits (96), Expect = 3e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 || ||| |||| || || | |||||||| || || ||| || || || || ||||| Sbjct 82424 CGTCTGATAGCTTTCGCGGTGGTGGAGGGTATTTTCTTCTCAGGCTCTTTCGCCGCCATA 82483 Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998 | |||||| ||| || ||| |||||||| || ||||||||||| |||||||| Sbjct 82484 TACTGGCTGAAGAAGCGGGGATTGATGCCCGGTTTGACGTTTTCCAACGAACTCATCAGT 82543 Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 || || ||||| | || | ||||||||| || |||| Sbjct 82544 AGAGATGAGGGCATGCATACAGATTTTGCATGTTTGCT 82581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928822577388160