Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq173 114 2e-20 seq92 100 3e-16 >seq173 Length=183199 Score = 114 bits (126), Expect = 2e-20 Identities = 354/539 (66%), Gaps = 24/539 (4%) Strand=Plus/Plus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 || || ||| || | || | || || || |||||||||| | ||||| ||||| ||| Sbjct 161148 TTCGACGCCGTCGAGACCATCCCTTGCATCAAGAAGAAGGCCGACTGGGCCATGAAGTGG 161207 Query 65050 TT------TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTG 65103 | ||||| |||| | ||||||| || ||||| | || ||||| || Sbjct 161208 ATCTCAGATGACA---AGTC---CACCTTCGCTGAACGCCTCGTCGCCTTTGCCGCCGTC 161261 Query 65104 GAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCT 65162 ||||| ||||||||||| || || || |||| | || | ||| | |||||||| ||||| Sbjct 161262 GAGGGCATCTTCTTCTCGGGCTCCTT-TGCGTCCATCTTCTGGCTCAAGAAGCGCGGTCT 161320 Query 65163 CATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGA 65222 |||||| ||||| |||||| || || || || ||| || ||||| | ||| || Sbjct 161321 CATGCCCGGCCTCACCTTCTCCAACGAGCTCATCAGCCGCGACGAGGGGATGCACACCGA 161380 Query 65223 GTTTGCCGTGGAGCTCTTCA-AGACTTTGCGTAATAGACCCACTACCGAAACTATCCACG 65281 ||||| |||||||| || | | | ||| |||| || ||| | Sbjct 161381 CTTTGCATGCCTGCTCTTCAGCCACCTCAAGCGCCGCGCGCAC-CCCGACACCGTCCGCC 161439 Query 65282 CCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTA 65341 |||| | | || || || | || ||| | | |||| || ||| || ||||| || | Sbjct 161440 GCATCATCACGGACGCCGTCGCCATCGAGCAGGAGTTCCTCACGGAAGCGCTCCCGTGCA 161499 Query 65342 ATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTC 65401 | |||||||| |||||||| || |||| | ||||||| |||| || |||| || | Sbjct 161500 AGCTCATCGGCATGAACTCGGACCTCATGTGCCAGTACATCGAGTTCGTCGCGGACCGCC 161559 Query 65402 TCCTCAAACAAGT---TGGGGTGCCAC-CCATTTGGAACGCGAAGAATCCATTTGACTTT 65457 | || | || | || | || | | |||| | ||| || || ||||| Sbjct 161560 TGCT----CGTGTCCCTCGGAAACGACAAGGTGTACAACGTCACGAACCCCTTCGACTTC 161615 Query 65458 ATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||| | || ||| | || ||||| |||||||| |||||||| || |||||| Sbjct 161616 ATGGACATGATCTCCCTGCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTGTCGGACTA 161674 >seq92 Length=307622 Score = 100 bits (110), Expect = 3e-16 Identities = 174/253 (69%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 || || ||||||||||||| | || |||||||| ||| | || ||| | |||| Sbjct 59510 ACTTGCTCATGCGGGTCGCCGTTGGTATCCACGGTTCTGACCTCGAGCACGTCCTCGAGA 59569 Query 75279 CATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTG 75338 | ||| ||| |||||| || || |||| |||||| | || || |||||||| || | Sbjct 59570 CGTACAACATGATGTCTGAACGTTACTTCACGCACGCATCCCCCACGCTCTTCAACGCCG 59629 Query 75339 GTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCA 75398 | ||||| ||||| ||||| || |||||||| ||||||| || || ||| || Sbjct 59630 GCACACCGCACCCGCAAATGTCGAGCTGCTTCCTCATCGCCATGAAAGACGACAGCATTG 59689 Query 75399 ACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTG 75458 | || ||||| | || || | | ||||| ||| || ||||| || |||| Sbjct 59690 AAGGCATCTACGACACGCTCAAGAGCTGTGCCATGATCAGCAAAACCGCTGGTGGCATTG 59749 Query 75459 GGATGCACATCCA 75471 || || ||||||| Sbjct 59750 GGCTGAACATCCA 59762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596555327072320