Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fibularhizoctonia_20sp._20CBS_20109695_20[genbank_20GCA_5F001630335. 1_202016-04-25] 1,914 sequences; 95,118,143 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq58 134 1e-26 seq30 129 5e-25 seq174 82.4 6e-11 >seq58 Length=383431 Score = 134 bits (148), Expect = 1e-26 Identities = 256/373 (69%), Gaps = 7/373 (2%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA-- 34260 ||||||||| |||| |||||||| ||||||| || | | | ||| | ||||| Sbjct 370865 CGGCGGGTTCTTCACGATGAAGGTCGTGAGCTTGTG-GCGCA-TGTCGATGTCCGTGTGC 370922 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 | ||||| || |||||| | ||| | | | | || | | | || ||| || Sbjct 370923 TCGCCGCACGCCTTGCAGTTGCGCAGGATGGTCTCCGTCTTCGTG---ATGACGAGGTCC 370979 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||||||||| | || | || | ||| |||||| |||||| | || ||||| Sbjct 370980 GTCTCCGGGTTCTTGCAGCTCTTGCAGAGCACGAACTTGTCGATGAACGCGTCGAGCAGC 371039 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 || | | ||| |||||| | |||||| |||||| | || ||||| || | ||| Sbjct 371040 TCGCGCAGGCGCGCGGCGTCGTGCGCGCCGTTCACGATGTAGCGGTCGTTCTTCTCGTCG 371099 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | ||| |||||||| |||||||| |||||| |||| |||||||| | | || || Sbjct 371100 AACGTCGTCTGCGCGCCGAGCTCGCAGCCGAAGAACTTGGTCGGGTACGTCGGGGGGCGG 371159 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 ||||| || || |||| |||||| |||||| || ||||||||||| ||||| Sbjct 371160 GAGAGCGCGCGGGAGACGTCGGACATGTTCGGGATGACGGTTTTGATGCCGTTCCCCTTG 371219 Query 34561 CCTTCGACCTTGG 34573 || |||| ||||| Sbjct 371220 CCCTCGATCTTGG 371232 >seq30 Length=554118 Score = 129 bits (142), Expect = 5e-25 Identities = 255/373 (68%), Gaps = 7/373 (2%) Strand=Plus/Plus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA-- 34260 ||||||||| |||| |||||||| ||||||| || | | | ||| | ||||| Sbjct 83672 CGGCGGGTTCTTCACGATGAAGGTCGTGAGCTTGTG-GCGCA-TGTCGATGTCCGTGTGC 83729 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 | ||||| || |||||| | ||| | | | | || | | | || ||| || Sbjct 83730 TCGCCGCACGCCTTGCAGTTGCGCAGGATGGTCTCCGTCTTCGTG---ATGACGAGGTCC 83786 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||||||||| | || | || | ||| |||||| |||||| | || ||||| Sbjct 83787 GTCTCCGGGTTCTTGCAGGTCTTGCAGAGCACGAACTTGTCGATGAACGCGTCGAGCAGC 83846 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 || | | ||| |||||| | |||||| |||||| | || ||||| || | ||| Sbjct 83847 TCGCGCAGGCGCGCGGCGTCGTGCGCGCCGTTCACGATGTAGCGGTCGTTCTTCTCGTCG 83906 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | ||| |||||||| |||||||| |||||| |||| |||||||| | | || || Sbjct 83907 AACGTCGTCTGCGCGCCGAGCTCGCAGCCGAAGAACTTGGTCGGGTACGTCGGGGGGCGG 83966 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 ||||| || || |||| |||||| |||||| || ||||||||||| || || Sbjct 83967 GAGAGCGCGCGGGAGACGTCGGACATGTTCGGGATGACGGTTTTGATGCCGTTCCCTTTG 84026 Query 34561 CCTTCGACCTTGG 34573 || |||| ||||| Sbjct 84027 CCCTCGATCTTGG 84039 >seq174 Length=181799 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| || | || ||||| ||||| || |||| ||| | | Sbjct 45306 ATGCAGATCTTTGTCAAGACGCTTACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCC 45247 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||||| ||||| || ||| | || || ||| Sbjct 45246 GACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAA 45187 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | ||||| | ||| || |||||||| ||||||| | || | ||||||||||| Sbjct 45186 CAGCGTCTTATCTTTGCCGGCAAACAGCTCGAGGATGGTCGCACGCTCTCGGATTACAAC 45127 Query 110453 ATTCAAAAAGAATCTACGTTGCA 110475 || || ||||| || || |||| Sbjct 45126 ATCCAGAAAGAGTCCACTCTGCA 45104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412831969695602